RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CCNA2P20248 432 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 IGHV1-2P23083 117 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 IGFBP5P24593 272 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 EDNRAP25101 427 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 TTKP33981 857 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 GSSP48637 474 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 HSPA13P48723 471 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 DAPP51397 102 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 NUDT6P53370 316 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 EGR4Q05215 589 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 RASGEF1BQ0VAM2 473 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 TSPAN31Q12999 210 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 STK11Q15831 433 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 C1orf140Q5VVS0 124 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 CLEC2AQ6UVW9 174 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 TMPRSS11FQ6ZWK6 438 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 ZER1Q7Z7L7 766 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 PARP8Q8N3A8 854 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 GALNT4Q8N4A0 578 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 PFN4Q8NHR9 129 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 LIPHQ8WWY8 451 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 BPIFA2Q96DR5 249 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 SGTBQ96EQ0 304 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 FAM46AQ96IP4 442 aaKnown RBP7.96□□□□□ -1.14
SF3A1-206ENST00000471037 ADAD1Q96M93 576 aaKnown RBP7.96□□□□□ -1.14
SF3A1-206ENST00000471037 CACNG6Q9BXT2 260 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 MEPEQ9NQ76 525 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-206ENST00000471037 KRT84Q9NSB2 600 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 CBLN4Q9NTU7 201 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 SMPD3Q9NY59 655 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-206ENST00000471037 TMEFF2Q9UIK5 374 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-206ENST00000471037 FREM1Q5H8C1 2179 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 CADP27708 2225 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 IGKV3D-15A0A087WSY6 115 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 IGHV3-15A0A0B4J1V0 119 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 ZC3H12DA2A288 527 aaKnown RBP7.95□□□□□ -1.14
SF3A1-206ENST00000471037 EFCAB9A8MZ26 197 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 H7C417 338 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 KPNA4O00629 521 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-206ENST00000471037 OR2T1O43869 369 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 OR7A10O76100 309 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 MT-ATP6P00846 226 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 SAGP10523 405 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-206ENST00000471037 TFPIP10646 304 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 PTAFRP25105 342 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 THBS2P35442 1172 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 GPR4P46093 362 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 SLC9A3P48764 834 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 AQP4P55087 323 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 ESRRGP62508 458 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 LSM11P83369 360 aaKnown RBP eCLIP7.95□□□□□ -1.14
SF3A1-206ENST00000471037 MFSD13AQ14CX5 517 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 PDK3Q15120 406 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF74Q16587 644 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 ANKDD1AQ495B1 522 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 SYT14P1Q58G82 188 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 FAM69AQ5T7M9 428 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 RPL13AP3Q6NVV1 102 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 TMEM108Q6UXF1 575 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 IZUMO2Q6UXV1 221 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 GALNT5Q7Z7M9 940 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF433Q8N7K0 673 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-206ENST00000471037 CLDN22Q8N7P3 220 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 KTI12Q96EK9 354 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF184Q99676 751 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-206ENST00000471037 NIPSNAP1Q9BPW8 284 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 DHRS9Q9BPW9 319 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 GABARAPL3Q9BY60 117 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 FKRPQ9H9S5 495 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 C20orf141Q9NUB4 165 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 LPAR3Q9UBY5 353 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF229Q9UJW7 825 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 HDGFL3Q9Y3E1 203 aa7.95□□□□□ -1.14
SF3A1-206ENST00000471037 UNC119BA6NIH7 251 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 E7EQL1 145 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 FZD7O75084 574 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 CH25HO95992 272 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 HIST1H2ABP04908 130 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 OSMP13725 252 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 MAKP20794 623 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 PTNP21246 168 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 RPS5P46782 204 aaKnown RBP7.94□□□□□ -1.14
SF3A1-206ENST00000471037 IL1RL1Q01638 556 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 TAF11Q15544 211 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 KRTAP24-1Q3LI83 254 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 FBXW9Q5XUX1 488 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 ABLIM2Q6H8Q1 611 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF544Q6NX49 715 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 KLHL17Q6TDP4 642 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 TMPPEQ6ZT21 453 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 RASSF6Q6ZTQ3 369 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 HIST3H2AQ7L7L0 130 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 SLC46A3Q7Z3Q1 461 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 OAFQ86UD1 273 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF100Q8IYN0 542 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 MUC15Q8N387 334 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 C10orf53Q8N6V4 93 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 ATP6V1C2Q8NEY4 427 aa7.94□□□□□ -1.14
SF3A1-206ENST00000471037 MFSD8Q8NHS3 518 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms