RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 PLCE1Q9P212 2302 aa13.12□□□□□ -0.31
DNMT3A-209ENST00000470983 SH3PXD2BA1X283 911 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 ATP6V1G2-DDX39BF2Z307 99 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 GYG2O15488 501 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 TMCC2O75069 709 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 LY6G6DO95868 133 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 HLA-HP01893 362 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 QDPRP09417 244 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 ACADSP16219 412 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 ZNF26P17031 533 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 OMPP47874 163 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 LIMS1P48059 325 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 SLC9A3P48764 834 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 FMODQ06828 376 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 MTX3Q5HYI7 312 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 MDP1Q86V88 176 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 MYPOPQ86VE0 399 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 CLDN22Q8N7P3 220 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 MCHR2Q969V1 340 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 RADILQ96JH8 1075 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 SLC38A2Q96QD8 506 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 TSPAN32Q96QS1 320 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 MRPL13Q9BYD1 178 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 IL1RAPQ9NPH3 570 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 CISD1Q9NZ45 108 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 ZNF346Q9UL40 294 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 MOKQ9UQ07 419 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 MGAT4BQ9UQ53 548 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 LAMP3Q9UQV4 416 aa13.11□□□□□ -0.31
DNMT3A-209ENST00000470983 E7EQL1 145 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 DHHO43323 396 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 SLC2A10O95528 541 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 IGHMP01871 453 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 SOD3P08294 240 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 CECR9P0C854 216 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 CD79AP11912 226 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 ACVR1BP36896 505 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 IDH3GP51553 393 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 ERVK-25P63136 954 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 PIGFQ07326 219 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 NPRL3Q12980 569 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 SMAP2Q8WU79 429 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 IGFBPL1Q8WX77 278 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 ASB9Q96DX5 294 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 RSRC1Q96IZ7 334 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 GPA33Q99795 319 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 KATNB1Q9BVA0 655 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 AURKCQ9UQB9 309 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 ADAM18Q9Y3Q7 739 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 ATP23Q9Y6H3 246 aa13.1□□□□□ -0.31
DNMT3A-209ENST00000470983 USF3Q68DE3 2245 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 ARID1AO14497 2285 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 IGKV1D-43A0A0B4J1Z2 117 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 NPIPB13A6NJU9 1138 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 NPIPB4C9JG80 1138 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 H7C1C5 153 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 ACOT8O14734 319 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 DANCRP0C864 163 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 PATE4P0C8F1 98 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 CBR1P16152 277 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 MAGEA2P43356 314 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 SMIM11AP58511 58 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 LCN6P62502 163 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 CD47Q08722 323 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 PPP1R8Q12972 351 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 HIST3H3Q16695 136 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 PGGHGQ32M88 737 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 DNAL1Q4LDG9 190 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 C1QTNF12Q5T7M4 302 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 ZNF627Q7L945 461 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 PIWIL3Q7Z3Z3 882 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 ZER1Q7Z7L7 766 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 FGFBP3Q8TAT2 258 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 ZNF519Q8TB69 540 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 GTPBP3Q969Y2 492 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 PERPQ96FX8 193 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 ZNF224Q9NZL3 707 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 CRNNQ9UBG3 495 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 IL20RAQ9UHF4 553 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 SIGLEC7Q9Y286 467 aa13.09□□□□□ -0.31
DNMT3A-209ENST00000470983 UNC119BA6NIH7 251 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 CENPBD1B2RD01 187 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 H7C1Q1 480 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 OR10H3O60404 316 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 IGKV3-15P01624 115 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 IGLV1-44P01699 117 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 CALCRP30988 508 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 FXYD6P3P58550 94 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 NAAAQ02083 359 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 CHRNB3Q05901 458 aa13.08□□□□□ -0.32
DNMT3A-209ENST00000470983 BNIP1Q12981 228 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms