RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SLC22A23A1A5C7 686 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 KPNA4O00629 521 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 BCL10O95999 233 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 HPXP02790 462 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 ASAH2BP0C7U1 165 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 PATE4P0C8F1 98 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 PGA4P0DJD7 388 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 PGA3P0DJD8 388 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 UMPSP11172 480 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 TCN1P20061 433 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 ACHEP22303 614 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 SRP14P37108 136 aaKnown RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 GPR6P46095 362 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 SEC24CP53992 1094 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 DVL1P1P54792 670 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 MRPS11P82912 194 aaKnown RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 SRSF2Q01130 221 aaKnown RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 CCNIQ14094 377 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 MELKQ14680 651 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 NRN1LQ496H8 165 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 NANOGNBQ7Z5D8 188 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 TSPYL5Q86VY4 417 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 OR10A6Q8NH74 314 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 THOC1Q96FV9 657 aaKnown RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 SIKE1Q9BRV8 207 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 C1orf198Q9H425 327 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 MYEF2Q9P2K5 600 aaKnown RBP15.01□□□□□ -0.01
COL7A1-208ENST00000470076 DUSP13Q9UII6 198 aa15.01□□□□□ -0.01
COL7A1-208ENST00000470076 A0A1W2PPW3 197 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 HMGB1P1B2RPK0 211 aaPredicted RBP15□□□□□ -0.01
COL7A1-208ENST00000470076 B4DSR2 109 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 IGHG1P01857 330 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 QDPRP09417 244 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 TMEM33P57088 247 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 SELENOVP59797 346 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 MAD2L1BPQ15013 274 aaPredicted RBP15□□□□□ -0.01
COL7A1-208ENST00000470076 VMACQ2NL98 169 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 SLC36A2Q495M3 483 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 RGS7BPQ6MZT1 257 aaPredicted RBP15□□□□□ -0.01
COL7A1-208ENST00000470076 TMEM53Q6P2H8 277 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 CCDC80Q76M96 950 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 SLC30A7Q8NEW0 376 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 SH3GL3Q99963 347 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 PRSS27Q9BQR3 290 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 RNF121Q9H920 327 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 GPR160Q9UJ42 338 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 FZR1Q9UM11 496 aa15□□□□□ -0.01
COL7A1-208ENST00000470076 CENPBD1B2RD01 187 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 BLOC1S5-TXNDC5H3BN57 136 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 TCF21O43680 179 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 MGRN1O60291 552 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 SNAP29O95721 258 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 PTHP01270 115 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 COL8A2P25067 703 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 ZNF84P51523 738 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 CLRN1P58418 232 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 HIST3H3Q16695 136 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 NKPD1Q17RQ9 610 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 METTL21CQ5VZV1 264 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 SLC16A14Q7RTX9 510 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 HDDC2Q7Z4H3 204 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 GLCCI1Q86VQ1 547 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 OR4K5Q8NGD3 323 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 ZNF416Q9BWM5 594 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 RACGAP1Q9H0H5 632 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 CDH20Q9HBT6 801 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 NPHS2Q9NP85 383 aa14.99□□□□□ -0.01
COL7A1-208ENST00000470076 MEPEQ9NQ76 525 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-208ENST00000470076 A0A1W2PRG6 482 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 TFP02787 698 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 MT-ND1P03886 318 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 FAM157BP0CG42 384 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 SAGP10523 405 aaPredicted RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 NAT2P11245 290 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 RBM34P42696 430 aaKnown RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 GZMMP51124 257 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 CRYBA2P53672 197 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 KLF3P57682 345 aaPredicted RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 PLP2Q04941 152 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 CYLC2Q14093 348 aaPredicted RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 TBC1D28Q2M2D7 210 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 NANOGP8Q6NSW7 305 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 OR1J2Q8NGS2 313 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 CLDND2Q8NHS1 167 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 MCHR2Q969V1 340 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 SEPHS2Q99611 448 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 SH3GL1Q99961 368 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 MRPL13Q9BYD1 178 aaKnown RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 POLR2J2Q9GZM3 115 aaKnown RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 POLR2J3Q9H1A7 115 aaKnown RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 LRMDAQ9H2I8 198 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 NANOGQ9H9S0 305 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 ZNF275Q9NSD4 429 aaPredicted RBP14.98□□□□□ -0.01
COL7A1-208ENST00000470076 BAG5Q9UL15 447 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 SH3GLB1Q9Y371 365 aa14.98□□□□□ -0.01
COL7A1-208ENST00000470076 IGLV3-9A0A075B6K5 115 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 A0A0G2JND7 137 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 IQCMA0A1B0GVH7 501 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 MCIDASD6RGH6 385 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 EDF1O60869 148 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms