RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 MESTQ5EB52 335 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 ARMC4Q5T2S8 1044 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 C12orf73Q69YU5 71 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 RTL6Q6ICC9 239 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 CXXC5Q7LFL8 322 aaKnown RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 FAM122BQ7Z309 247 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 GID4Q8IVV7 300 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 RPRMLQ8N4K4 120 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 TCEANCQ8N8B7 351 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 LRRC75AQ8NAA5 344 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 CYB561A3Q8NBI2 242 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 SLC37A3Q8NCC5 494 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 OR8J1Q8NGP2 316 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 OR6K6Q8NGW6 343 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 OR2T4Q8NH00 348 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF519Q8TB69 540 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 TMEM163Q8TC26 289 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 ASB5Q8WWX0 329 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 NSMAFQ92636 917 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 RFKQ969G6 155 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 TXNDC15Q96J42 360 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 CNBD2Q96M20 576 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 Q96MT0 163 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 SNX18Q96RF0 628 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 IL4I1Q96RQ9 567 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 NMNAT3Q96T66 252 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 PITX2Q99697 317 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 ENKD1Q9H0I2 346 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 SYT4Q9H2B2 425 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 PIGMQ9H3S5 423 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 FN3KQ9H479 309 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 RPRD1BQ9NQG5 326 aaKnown RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 RASSF1Q9NS23 344 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 CLN6Q9NWW5 311 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 GLTPQ9NZD2 209 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 SLC5A6Q9Y289 635 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 POLR1DQ9Y2S0 133 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 GPR52Q9Y2T5 361 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF407Q9C0G0 2248 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 M0R129 80 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 SLC16A6O15403 523 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 LRRTM2O43300 516 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 SLC16A7O60669 478 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 KHDRBS3O75525 346 aaKnown RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 IL18BPO95998 194 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 IGHV3-9P01782 118 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 PGA4P0DJD7 388 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 PGA3P0DJD8 388 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 EPHA2P29317 976 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 CHRNB4P30926 498 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 ATP6V1E1P36543 226 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 OR3A2P47893 321 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 ROR2Q01974 943 aaKnown RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 TGFBR3Q03167 851 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 GLO1Q04760 184 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 FAPQ12884 760 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 CRMP1Q14194 572 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 THEM4Q5T1C6 240 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF691Q5VV52 312 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 ACSM5Q6NUN0 579 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 PLBD1Q6P4A8 553 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 KLHL24Q6TFL4 600 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 BEND4Q6ZU67 534 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 NUFIP2Q7Z417 695 aaKnown RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 LUZP2Q86TE4 346 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 OR10H5Q8NGA6 315 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 OR9Q1Q8NGQ5 310 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 CA5BP1Q8WTZ4 195 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 TRUB1Q8WWH5 349 aaKnown RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 HDAC2Q92769 488 aaKnown RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 LRR1Q96L50 414 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 RBM24Q9BX46 236 aaKnown RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 OR51V1Q9H2C8 321 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF629Q9UEG4 869 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 NDRG4Q9ULP0 352 aaKnown RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 HSPE1-MOB4S4R3N1 261 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 FREM3P0C091 2139 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 MED12Q93074 2177 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 FLNCQ14315 2725 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 RP1L1Q8IWN7 2480 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-216ENST00000468949 DNAJC13O75165 2243 aa7.19□□□□□ -1.26
HDAC6-216ENST00000468949 MPDZO75970 2070 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SETXQ7Z333 2677 aaKnown RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 PTPN13Q12923 2485 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 A0A0G2JNJ9 132 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CIB4A0PJX0 185 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SLC22A23A1A5C7 686 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SLC22A31A6NKX4 558 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 FAM183AA6NL82 134 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 FAM90A27PA6NNH2 459 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 PRODHO43272 600 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 PRKYO43930 277 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 FARS2O95363 451 aaKnown RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SLC2A10O95528 541 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CNOT4O95628 575 aaKnown RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CLIC3O95833 236 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 QDPRP09417 244 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 IL32P24001 234 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CEACAM8P31997 349 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms