RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ZFPL1O95159 310 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 WISP1O95388 367 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 HPP00738 406 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 CD37P11049 281 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 EPXP11678 715 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 IMPDH2P12268 514 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 ZNF17P17021 662 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SRMP19623 302 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 AHCYP23526 432 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 AVPR2P30518 371 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 TALDO1P37837 337 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 CD97P48960 835 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SSR4P51571 173 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 FOXL2P58012 376 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 MLF1P58340 268 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 TLE3Q04726 772 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 FOXF1Q12946 379 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 INSL4Q14641 139 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SLC17A1Q14916 467 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 ANGPT1Q15389 498 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 BAK1Q16611 211 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 Q499Y3 187 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 THEM4Q5T1C6 240 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 FAM69BQ5VUD6 431 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 ARSKQ6UWY0 536 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
COL6A3-208ENST00000468792 CCBE1Q6UXH8 406 aaPredicted RBP6.84□□□□□ -1.31
COL6A3-208ENST00000468792 RPTNQ6XPR3 784 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 PRR23CQ6ZRP0 262 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 RPS19BP1Q86WX3 136 aaKnown RBP6.84□□□□□ -1.31
COL6A3-208ENST00000468792 PLCZ1Q86YW0 608 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SNX29P2Q8IUI4 249 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 PM20D2Q8IYS1 436 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 CADM3Q8N126 398 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 OR8H2Q8N162 312 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 WDSUB1Q8N9V3 476 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 DUSP18Q8NEJ0 188 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 OR2G2Q8NGZ5 317 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 RNF128Q8TEB7 428 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 THAP3Q8WTV1 239 aaPredicted RBP6.84□□□□□ -1.31
COL6A3-208ENST00000468792 ADAMTS14Q8WXS8 1223 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 TMEM41AQ96HV5 264 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 TSSK2Q96PF2 358 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 DERL3Q96Q80 235 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 CDC6Q99741 560 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 MESP1Q9BRJ9 268 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 GPR87Q9BY21 358 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 MRPL13Q9BYD1 178 aaKnown RBP6.84□□□□□ -1.31
COL6A3-208ENST00000468792 OR11A1Q9GZK7 315 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SLC22A4Q9H015 551 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 ARRDC1-AS1Q9H2J1 176 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 GALNT9Q9HCQ5 603 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SACM1LQ9NTJ5 587 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 FRRS1LQ9P0K9 344 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 KCNG2Q9UJ96 466 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SPATA2Q9UM82 520 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 MRPS18CQ9Y3D5 142 aaKnown RBP6.84□□□□□ -1.31
COL6A3-208ENST00000468792 SPEGQ15772 3267 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 TRBV5-7A0A0A0MS05 114 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 NSG1A0A0A6YYJ2 146 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 A0A1W2PQ09 198 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 LNP1A1A4G5 178 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 C17orf51A8MQB3 221 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 PRR32B1ATL7 298 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 C21orf140B9A014 251 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 NPIPA5E9PKD4 350 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 C11orf98E9PRG8 122 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 AIPO00170 330 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF593O00488 134 aaPredicted RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 GPR171O14626 319 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 CTDSPLO15194 276 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SLC16A7O60669 478 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 EIF1BO60739 113 aaKnown RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 HPGDSO60760 199 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 KHDRBS3O75525 346 aaKnown RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 STK17BO94768 372 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 VAMP5O95183 116 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 PMS2P2O95744 297 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 HNRNPCP07910 306 aaKnown RBP eCLIP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF806P0C7X5 589 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 TRAPPC2P0DI81 140 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 TRAPPC2BP0DI82 140 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 CALCBP10092 127 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SLC2A2P11168 524 aaPredicted RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 NR2C1P13056 603 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 CD59P13987 128 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 CTLA4P16410 223 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 MNDAP41218 407 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 RFX2P48378 723 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 P2RY4P51582 365 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 CAV3P56539 151 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 DSCR4P56555 118 aaPredicted RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 NANOS3P60323 173 aaKnown RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SLC35A1P78382 337 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 H3F3AP84243 136 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 PITPNAQ00169 270 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 HSF1Q00613 529 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 MYBPHQ13203 477 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 POU4F3Q15319 338 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 OR7A5Q15622 319 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms