RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ANKRD11Q6UB99 2663 aaPredicted RBP18.38■□□□□ 0.53
TMEM53-207ENST00000468117 IGLV1-36A0A0B4J1U3 117 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 MAGEB4O15481 346 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-207ENST00000468117 LRRTM2O43300 516 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 ENPP1P22413 925 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 CENPAP49450 140 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 OR12D2P58182 307 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 OTPQ5XKR4 325 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 FAM205BPQ63HN1 556 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 HBMQ6B0K9 141 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 ESPNLQ6ZVH7 1005 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 TIGD4Q8IY51 512 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 ZFP62Q8NB50 900 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-207ENST00000468117 TMEM178AQ8NBL3 297 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 C4orf36Q96KX1 117 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 WDR76Q9H967 626 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 ISYNA1Q9NPH2 558 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 ZMIZ1Q9ULJ6 1067 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 J3QLW9 94 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 SLC22A1O15245 554 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 AKAP8O43823 692 aaKnown RBP18.37■□□□□ 0.53
TMEM53-207ENST00000468117 ZNF19P17023 458 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 CLDN15P56746 228 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 RAC3P60763 192 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 IGFL2Q6UWQ7 119 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 SLC16A9Q7RTY1 509 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 CENPOQ9BU64 300 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 SLC6A15Q9H2J7 730 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 RNF167Q9H6Y7 350 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 RASD1Q9Y272 281 aa18.37■□□□□ 0.53
TMEM53-207ENST00000468117 PHF3Q92576 2039 aaKnown RBP18.36■□□□□ 0.53
TMEM53-207ENST00000468117 LOC102725191A0A1B0GVB3 256 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 SLC35F4A4IF30 521 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 HLA-DQA2P01906 255 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 RPS27P42677 84 aaKnown RBP18.36■□□□□ 0.53
TMEM53-207ENST00000468117 EIF1AXP47813 144 aaKnown RBP18.36■□□□□ 0.53
TMEM53-207ENST00000468117 CARD18P57730 90 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 PPIAP62937 165 aaKnown RBP18.36■□□□□ 0.53
TMEM53-207ENST00000468117 ACSM1Q08AH1 577 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 CAMK2DQ13557 499 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 TPBGQ13641 420 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 HYAL4Q2M3T9 481 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 UFD1Q92890 307 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 TMEM203Q969S6 136 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 ADGRG7Q96K78 797 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 NAA11Q9BSU3 229 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-207ENST00000468117 CCDC86Q9H6F5 360 aaKnown RBP18.36■□□□□ 0.53
TMEM53-207ENST00000468117 BABAM2Q9NXR7 383 aa18.36■□□□□ 0.53
TMEM53-207ENST00000468117 SPENQ96T58 3664 aaKnown RBP18.36■□□□□ 0.53
TMEM53-207ENST00000468117 GPX5O75715 221 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 MT-ND5P03915 603 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 CELP19835 753 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 CRABP1P29762 137 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 AGFG1P52594 562 aaKnown RBP18.35■□□□□ 0.53
TMEM53-207ENST00000468117 TP53I3Q53FA7 332 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 VASNQ6EMK4 673 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 OR6N2Q8NGY6 317 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 OR10D3Q8NH80 312 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 MRPL13Q9BYD1 178 aaKnown RBP18.35■□□□□ 0.53
TMEM53-207ENST00000468117 COA3Q9Y2R0 106 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-207ENST00000468117 IGKV1D-43A0A0B4J1Z2 117 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 SMAD9O15198 467 aaKnown RBP18.35■□□□□ 0.53
TMEM53-207ENST00000468117 CXCL13O43927 109 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 CEACAM4O75871 244 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 PSMA1P25786 263 aaKnown RBP18.35■□□□□ 0.53
TMEM53-207ENST00000468117 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-207ENST00000468117 OR2V1Q8NHB1 315 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 ZHX1-C8orf76Q96EF9 292 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 SLC25A44Q96H78 314 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-207ENST00000468117 INTS14Q96SY0 518 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 MFRPQ9BY79 579 aa18.35■□□□□ 0.53
TMEM53-207ENST00000468117 E9PI62 339 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 LINC01387J3KSC0 135 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 VAMP5O95183 116 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 PAX7P23759 505 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 CRYBB2P43320 205 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 CLDN17P56750 224 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 TIMM50Q3ZCQ8 353 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 CARD17Q5XLA6 110 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 TRILQ7L0X0 811 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 DPY19L4Q7Z388 723 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 SLC22A16Q86VW1 577 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 SNX33Q8WV41 574 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 EXOSC4Q9NPD3 245 aaKnown RBP18.34■□□□□ 0.53
TMEM53-207ENST00000468117 MRPL22Q9NWU5 206 aaKnown RBP18.34■□□□□ 0.53
TMEM53-207ENST00000468117 KLHDC2Q9Y2U9 406 aa18.34■□□□□ 0.53
TMEM53-207ENST00000468117 SIRT4Q9Y6E7 314 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-207ENST00000468117 PSMD9O00233 223 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 DNPH1O43598 174 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 ITGB2P05107 769 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 PGA4P0DJD7 388 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 PGA3P0DJD8 388 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 PSKH1P11801 424 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 LHX2P50458 406 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 CLRN1P58418 232 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 ACTA2P62736 377 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 RPS25P62851 125 aaKnown RBP18.33■□□□□ 0.53
TMEM53-207ENST00000468117 ACTG2P63267 376 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 GLO1Q04760 184 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 CDONQ4KMG0 1287 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms