RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TMEM38BQ9NVV0 291 aa18.07■□□□□ 0.48
COL9A3-207ENST00000467819 TRAPPC13A5PLN9 417 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 B4DSR2 109 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 DHHO43323 396 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 HIST1H2ABP04908 130 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 CCL2P13500 99 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 ITGA2P17301 1181 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 CD247P20963 164 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 ACHEP22303 614 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 TTMPQ5BVD1 217 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 RGS7BPQ6MZT1 257 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-207ENST00000467819 HIST3H2AQ7L7L0 130 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 GLCCI1Q86VQ1 547 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 PAQR4Q8N4S7 273 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-207ENST00000467819 DPP10Q8N608 796 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 SLC30A7Q8NEW0 376 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 SLC26A7Q8TE54 656 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 HIST1H2ACQ93077 130 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 SLC25A44Q96H78 314 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-207ENST00000467819 RNF121Q9H920 327 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF229Q9UJW7 825 aa18.06■□□□□ 0.48
COL9A3-207ENST00000467819 FAM157AC9JC47 383 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 WNT9BO14905 357 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 ENTPD5O75356 428 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 FARS2O95363 451 aaKnown RBP18.05■□□□□ 0.48
COL9A3-207ENST00000467819 QDPRP09417 244 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 PGA4P0DJD7 388 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 PGA3P0DJD8 388 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 PCMT1P22061 227 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 NFYCQ13952 458 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 NKPD1Q17RQ9 610 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 TMEM53Q6P2H8 277 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 NANOGNBQ7Z5D8 188 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 PATL1Q86TB9 770 aaKnown RBP18.05■□□□□ 0.48
COL9A3-207ENST00000467819 OR4K5Q8NGD3 323 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 TAMM41Q96BW9 452 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 KAT8Q9H7Z6 458 aaKnown RBP18.05■□□□□ 0.48
COL9A3-207ENST00000467819 CDH20Q9HBT6 801 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 TREM2Q9NZC2 230 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 TAAR3PQ9P1P4 343 aa18.05■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF346Q9UL40 294 aaKnown RBP18.05■□□□□ 0.48
COL9A3-207ENST00000467819 PPIHO43447 177 aaKnown RBP18.04■□□□□ 0.48
COL9A3-207ENST00000467819 BCL10O95999 233 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 CLPTM1O96005 669 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 PCGF2P35227 344 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 MAGEB1P43366 347 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 CLRN1P58418 232 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 MYBPC1Q00872 1141 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 SLC30A8Q8IWU4 369 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 OR10A6Q8NH74 314 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 MPP4Q96JB8 637 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 TSPAN32Q96QS1 320 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF347Q96SE7 839 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 OCEL1Q9H607 264 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF385DQ9H6B1 395 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 HIF1ANQ9NWT6 349 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 METRNQ9UJH8 293 aa18.04■□□□□ 0.48
COL9A3-207ENST00000467819 WNK2Q9Y3S1 2297 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 BLOC1S5-TXNDC5H3BN57 136 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 IGHG1P01857 330 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 TFP02787 698 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 LCKP06239 509 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 ASAH2BP0C7U1 165 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 ERVS71-1P61550 626 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 SLC16A14Q7RTX9 510 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 ICA1LQ8NDH6 482 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF426Q9BUY5 554 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 SLC19A3Q9BZV2 496 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 RACGAP1Q9H0H5 632 aa18.03■□□□□ 0.48
COL9A3-207ENST00000467819 METTL17Q9H7H0 456 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-207ENST00000467819 MEPEQ9NQ76 525 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-207ENST00000467819 INTS9Q9NV88 658 aaKnown RBP18.03■□□□□ 0.48
COL9A3-207ENST00000467819 SLC22A23A1A5C7 686 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 MCIDASD6RGH6 385 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 RP2O75695 350 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 F13BP05160 661 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF84P51523 738 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 TMEM33P57088 247 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 KLF3P57682 345 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-207ENST00000467819 SELENOVP59797 346 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 RUNX1T1Q06455 604 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 TBC1D28Q2M2D7 210 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 SLC36A2Q495M3 483 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 INTS11Q5TA45 600 aaKnown RBP18.02■□□□□ 0.48
COL9A3-207ENST00000467819 LRRC18Q8N456 261 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 SYT14Q8NB59 555 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 NOXO1Q8NFA2 376 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 SYNPRQ8TBG9 265 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 SNX33Q8WV41 574 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 MCHR2Q969V1 340 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 TMEM186Q96B77 213 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 PRSS27Q9BQR3 290 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 ZNF416Q9BWM5 594 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 PCDHAC1Q9H158 963 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 C1orf198Q9H425 327 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 TRIM33Q9UPN9 1127 aa18.02■□□□□ 0.48
COL9A3-207ENST00000467819 C17orf100A8MU93 164 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 CDC14BO60729 498 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 MSMBP08118 114 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 GAAP10253 952 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms