RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 DUX4L9Q6RFH8 374 aaPredicted RBP2.9□□□□□ -1.95
VPS13A-209ENST00000467124 ACP7Q6ZNF0 438 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 C11orf53Q8IXP5 236 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 PDIK1LQ8N165 341 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 GABRG1Q8N1C3 465 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 TMEM54Q969K7 222 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 SH3GL1Q99961 368 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 RIOK2Q9BVS4 552 aaKnown RBP2.9□□□□□ -1.95
VPS13A-209ENST00000467124 RACGAP1Q9H0H5 632 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 RPF2Q9H7B2 306 aaKnown RBP2.9□□□□□ -1.95
VPS13A-209ENST00000467124 AGPAT4Q9NRZ5 378 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DEC1Q9P2X7 70 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DUX4Q9UBX2 424 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 GNPTGQ9UJJ9 305 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 TP53TG3Q9ULZ0 132 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 ING4Q9UNL4 249 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 TRAPPC4Q9Y296 219 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 SMAD5-AS1Q9Y6J3 95 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 PLEKHG1Q9ULL1 1385 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 TRBV11-1A0A0K0K1C0 115 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 GOLGA6L7A0A1B0GV03 622 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 DYNC1I1O14576 645 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 FAM189A1O60320 539 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 EEDO75530 441 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 CSF3P09919 207 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 MYL2P10916 166 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 GSTM3P21266 225 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 NAMPTP43490 491 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 FGF8P55075 233 aaPredicted RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 EIF3EP60228 445 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 RAB10P61026 200 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 UBE2MP61081 183 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 NUTF2P61970 127 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 GNB2P62879 340 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF79Q15937 498 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 LRRC10Q5BKY1 277 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 C6orf89Q6UWU4 347 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 MMAAQ8IVH4 418 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF321PQ8N8H1 164 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 PRELID2Q8N945 189 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 CCDC54Q8NEL0 328 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 DNAJC19Q96DA6 116 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 DUS3LQ96G46 650 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 TGS1Q96RS0 853 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 GABARAPL3Q9BY60 117 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 C20orf96Q9NUD7 363 aaPredicted RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 EXD2Q9NVH0 621 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 MRPL22Q9NWU5 206 aaKnown RBP2.89□□□□□ -1.95
VPS13A-209ENST00000467124 XCL2Q9UBD3 114 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 AGRNO00468 2067 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 FANCIQ9NVI1 1328 aa2.89□□□□□ -1.95
VPS13A-209ENST00000467124 A0A1B0GVI7 797 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 H0YIV9 168 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 CDC7O00311 574 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 AIREO43918 545 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 DPM1O60762 260 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 EIF3GO75821 320 aaKnown RBP eCLIP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 BBOX1O75936 387 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 INSP01308 110 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 CMA1P23946 247 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 STOMP27105 288 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 HMOX2P30519 316 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 CTRLP40313 264 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 SLC1A1P43005 524 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 TFPI2P48307 235 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 NCBP2P52298 156 aaKnown RBP eCLIP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 SH3BGRP55822 239 aaPredicted RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 ITIH4Q14624 930 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 GPNMBQ14956 572 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 PSG5Q15238 335 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 IL17AQ16552 155 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 HADHQ16836 314 aaKnown RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 HIKESHIQ53FT3 197 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 PIP5KL1Q5T9C9 394 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 AGBL2Q5U5Z8 902 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 OR52W1Q6IF63 320 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 C12orf54Q6X4T0 127 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 MBOAT1Q6ZNC8 495 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 COMMD1Q8N668 190 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 SUMF2Q8NBJ7 301 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 OR4F15Q8NGB8 312 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 LINC01006Q8NI28 216 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 LYPD6BQ8NI32 183 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 GEMIN6Q8WXD5 167 aaKnown RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 TMEM158Q8WZ71 300 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF707Q96C28 371 aaPredicted RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 ZIM3Q96PE6 472 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 SLC7A5P2Q9GIP4 190 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 IQCGQ9H095 443 aaKnown RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 DEFB127Q9H1M4 99 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 NXF3Q9H4D5 531 aaKnown RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 AUNIPQ9H7T9 357 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 EML4Q9HC35 981 aaKnown RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 PXMP2Q9NR77 195 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 LYARQ9NX58 379 aaKnown RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 UXTQ9UBK9 157 aaPredicted RBP2.88□□□□□ -1.95
VPS13A-209ENST00000467124 NEU3Q9UQ49 428 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 NEUROG3Q9Y4Z2 214 aa2.88□□□□□ -1.95
VPS13A-209ENST00000467124 MRPS18BQ9Y676 258 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms