RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 EVX1P49640 407 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 ARFIP2P53365 341 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 HSF2Q03933 536 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 ZP4Q12836 540 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 CCNIQ14094 377 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 TBC1D28Q2M2D7 210 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 RGS7BPQ6MZT1 257 aaPredicted RBP15.11■□□□□ 0.01
COL7A1-206ENST00000466591 NANOGP8Q6NSW7 305 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 LINC00114Q6XXX2 140 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 WDR88Q6ZMY6 472 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 ZNF627Q7L945 461 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 DPPA2Q7Z7J5 298 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 SKA3Q8IX90 412 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 PHC2Q8IXK0 858 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 LINC01356Q8N9X3 169 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 OR1J2Q8NGS2 313 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 TMEM54Q969K7 222 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 LRRC58Q96CX6 371 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 TPD52L3Q96J77 140 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 SH3GL3Q99963 347 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 C1orf198Q9H425 327 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 ZNF385DQ9H6B1 395 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 NANOGQ9H9S0 305 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 CCNB1IP1Q9NPC3 277 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 TMEM38BQ9NVV0 291 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 GID8Q9NWU2 228 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 STX18Q9P2W9 335 aaKnown RBP15.11■□□□□ 0.01
COL7A1-206ENST00000466591 ARFGEF3Q5TH69 2177 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 BBIP1A8MTZ0 92 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 TPD52L2O43399 206 aaKnown RBP15.1■□□□□ 0.01
COL7A1-206ENST00000466591 MT-ND5P03915 603 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 SERPINA5P05154 406 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 F13BP05160 661 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 FAM157BP0CG42 384 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 NR2C1P13056 603 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 FUT1P19526 365 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 DRD4P21917 467 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 PCMT1P22061 227 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 GIFP27352 417 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 MYBPC1Q00872 1141 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 ALKBH6Q3KRA9 238 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 RABL3Q5HYI8 236 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 SYT14Q8NB59 555 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 OR4K5Q8NGD3 323 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 OR8J3Q8NGG0 315 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 OR4D11Q8NGI4 311 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 SGTBQ96EQ0 304 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 NARFLQ9H6Q4 476 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 INIPQ9NRY2 104 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 TAS2R5Q9NYW4 299 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 MED31Q9Y3C7 131 aa15.1■□□□□ 0.01
COL7A1-206ENST00000466591 TMEM129A0AVI4 362 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 LYNX1G3V0Z9 82 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 SHOX2O60902 331 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 MT-ND1P03886 318 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 LYNX1P0DP58 116 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 ZNF35P13682 527 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 CCNOP22674 350 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 APLNRP35414 380 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 RBM34P42696 430 aaKnown RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 GUCA1AP43080 201 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 GPR6P46095 362 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 CD47Q08722 323 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 MAD2L1BPQ15013 274 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 CR1LQ2VPA4 569 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 LIPNQ5VXI9 398 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 TMEM154Q6P9G4 183 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 CCDC80Q76M96 950 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 LRRC18Q8N456 261 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 RBM15BQ8NDT2 890 aaKnown RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 NOXO1Q8NFA2 376 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 PFN4Q8NHR9 129 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 TMEM239Q8WW34 195 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 LZICQ8WZA0 190 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 HPS1Q92902 700 aa15.09■□□□□ 0.01
COL7A1-206ENST00000466591 POLR2J2Q9GZM3 115 aaKnown RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 POLR2J3Q9H1A7 115 aaKnown RBP15.09■□□□□ 0.01
COL7A1-206ENST00000466591 OR7A10O76100 309 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 OR5F1O95221 314 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 NPPAP01160 153 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 ASAH2BP0C7U1 165 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 PGA4P0DJD7 388 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 PGA3P0DJD8 388 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 NAT2P11245 290 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 TNFRSF1BP20333 461 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 RAD52P43351 418 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 OR1E2P47887 323 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 KLF3P57682 345 aaPredicted RBP15.08■□□□□ 0
COL7A1-206ENST00000466591 RPL18Q07020 188 aaKnown RBP15.08■□□□□ 0
COL7A1-206ENST00000466591 TOP3AQ13472 1001 aaPredicted RBP15.08■□□□□ 0
COL7A1-206ENST00000466591 WDFY1Q8IWB7 410 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 TMEM255BQ8WV15 326 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 C11orf40Q8WZ69 217 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 RDH5Q92781 318 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 MCHR2Q969V1 340 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 ZNF347Q96SE7 839 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 PCDHAC1Q9H158 963 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 TAAR3PQ9P1P4 343 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 RIMS3Q9UJD0 308 aa15.08■□□□□ 0
COL7A1-206ENST00000466591 RTTNQ86VV8 2226 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms