RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ADARB1P78563 741 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 CLINT1Q14677 625 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF836Q6ZNA1 936 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF621Q6ZSS3 439 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 TMEM179Q6ZVK1 233 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 BZW1Q7L1Q6 419 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF429Q86V71 674 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 PDIK1LQ8N165 341 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 EID2Q8N6I1 236 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 MDS2Q8NDY4 140 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 OR52K2Q8NGK3 314 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 FAM81AQ8TBF8 368 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 DTX3LQ8TDB6 740 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 GEMIN6Q8WXD5 167 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 ASB9Q96DX5 294 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 PIK3IP1Q96FE7 263 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 TMEM185BQ9H7F4 350 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 ABCB10Q9NRK6 738 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 UXTQ9UBK9 157 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 PCYOX1Q9UHG3 505 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 HEBP2Q9Y5Z4 205 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 WDR62O43379 1518 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 PRSS37A4D1T9 235 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 A6NDX4 124 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 FAM166BA8MTA8 275 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 CDC7O00311 574 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 PES1O00541 588 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 NDUFAB1O14561 156 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 RAB29O14966 203 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 EEDO75530 441 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 C6orf47O95873 294 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZDHHC11BP0C7U3 371 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 ADRB3P13945 408 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 SYKP43405 635 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 RFX3P48380 749 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 TMED10P49755 219 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 RORCP51449 518 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF133P52736 654 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 TGM3Q08188 693 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 SMARCB1Q12824 385 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 ECH1Q13011 328 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 UNC119Q13432 240 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 PRPSAP1Q14558 356 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZBED5Q49AG3 693 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 C9orf135Q5VTT2 229 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 Q6ZSR3 168 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 SCD5Q86SK9 330 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 LUZP2Q86TE4 346 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 MREGQ8N565 214 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 Q8N9W7 124 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 LKAAEAR1Q8TD35 194 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 CD300LFQ8TDQ1 290 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 TSSK3Q96PN8 268 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 P2RX4Q99571 388 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 C20orf24Q9BUV8 137 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR51M1Q9H341 326 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 FGF20Q9NP95 211 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 DMAP1Q9NPF5 467 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 SAMSN1Q9NSI8 373 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 GPATCH2LQ9NWQ4 482 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 PITPNC1Q9UKF7 332 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 TRAPPC4Q9Y296 219 aa2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 CENPJQ9HC77 1338 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 COL16A1Q07092 1604 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-211ENST00000466538 CARMIL3Q8ND23 1372 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 CEMIPQ8WUJ3 1361 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 NINLQ9Y2I6 1382 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 IGHV3-64DA0A0J9YX35 117 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 PPP1R2P9O14990 202 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 DFNA5O60443 496 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 CDH16O75309 829 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 CA11O75493 328 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR2J3O76001 311 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR2F2O95006 317 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 CLIC3O95833 236 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 BGLAPP02818 100 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 PCCAP05165 728 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 GALP22466 123 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 OMGP23515 440 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 CX3CR1P49238 355 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 RAB10P61026 200 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 HMGCS1Q01581 520 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 TWF1Q12792 350 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 GUCA2BQ16661 112 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 TMEM183BQ1AE95 376 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 PIGGQ5H8A4 983 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 CYB5R2Q6BCY4 276 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 ABHD13Q7L211 337 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 ASCL5Q7RTU5 278 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 TMEM183AQ8IXX5 376 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 HSD17B11Q8NBQ5 300 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR51G1Q8NGK1 321 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 ACTRT1Q8TDG2 376 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 KIFAP3Q92845 792 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 EXOSC8Q96B26 276 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 RNF185Q96GF1 192 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 EXO5Q9H790 373 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 UGT1A7Q9HAW7 530 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 UGT1A10Q9HAW8 530 aa2.89□□□□□ -1.95
CDC42BPA-211ENST00000466538 UGT1A8Q9HAW9 530 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms