RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 PAQR4Q8N4S7 273 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-220ENST00000464800 C10orf53Q8N6V4 93 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 FGFBP3Q8TAT2 258 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 ZNF519Q8TB69 540 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 C11orf40Q8WZ69 217 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 RAB1CQ92928 201 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 MOGAT1Q96PD6 335 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 GAL3ST1Q99999 423 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 C1orf198Q9H425 327 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 RAD21L1Q9H4I0 556 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 SAP30LQ9HAJ7 183 aa12.44□□□□□ -0.42
MCF2L-220ENST00000464800 TESQ9UGI8 421 aaKnown RBP12.44□□□□□ -0.42
MCF2L-220ENST00000464800 PLPP3O14495 311 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 FARS2O95363 451 aaKnown RBP12.43□□□□□ -0.42
MCF2L-220ENST00000464800 CCL2P13500 99 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 BIDP55957 195 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 TBC1D28Q2M2D7 210 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 TMEM53Q6P2H8 277 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 TREML4Q6UXN2 200 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 NHLRC1Q6VVB1 395 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 ZNF771Q7L3S4 317 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-220ENST00000464800 COMTD1Q86VU5 262 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 TREML1Q86YW5 311 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 ICA1LQ8NDH6 482 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 MAELQ96JY0 434 aaKnown RBP12.43□□□□□ -0.42
MCF2L-220ENST00000464800 BCL2L14Q9BZR8 327 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 ZMAT3Q9HA38 289 aaKnown RBP12.43□□□□□ -0.42
MCF2L-220ENST00000464800 SDR39U1Q9NRG7 319 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-220ENST00000464800 ZIM2Q9NZV7 527 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 OPN4Q9UHM6 478 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 CACNG2Q9Y698 323 aa12.43□□□□□ -0.42
MCF2L-220ENST00000464800 ARHGAP32A7KAX9 2087 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 A0A0B4J2E0 115 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 A0A1B0GX12 115 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 TMEM120BA0PK00 339 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 C11orf98E9PRG8 122 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 UBDO15205 165 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 SNAP29O95721 258 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 ADORA3P0DMS8 318 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 ARAFP10398 606 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 BMP2P12643 396 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 DRD4P21917 467 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 POLR2JP52435 117 aaKnown RBP12.42□□□□□ -0.42
MCF2L-220ENST00000464800 LCN2P80188 198 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 GLO1Q04760 184 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 MOGQ16653 247 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 TSTQ16762 297 aaKnown RBP12.42□□□□□ -0.42
MCF2L-220ENST00000464800 DHRS4L2Q6PKH6 230 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 DPPA2Q7Z7J5 298 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 SIGLECL1Q8N7X8 197 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 OR9I1Q8NGQ6 314 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 GTF3AQ92664 365 aaKnown RBP12.42□□□□□ -0.42
MCF2L-220ENST00000464800 DVL3Q92997 716 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-220ENST00000464800 TMEM54Q969K7 222 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 ELMOD3Q96FG2 381 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 SH3GL3Q99963 347 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 RNF121Q9H920 327 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 TMEM27Q9HBJ8 222 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 TCF7L2Q9NQB0 619 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 TMEM38BQ9NVV0 291 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 GLTPQ9NZD2 209 aa12.42□□□□□ -0.42
MCF2L-220ENST00000464800 ISPDA4D126 451 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 DNAJC9-AS1A6NH13 148 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 LRRN3E7EW58 273 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 CLIC1O00299 241 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 OR6A2O95222 327 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 MT-ATP6P00846 226 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 PTHP01270 115 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 PRTN3P24158 256 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 UCP2P55851 309 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 RGS8P57771 180 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-220ENST00000464800 OR1Q1Q15612 314 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 SLC36A2Q495M3 483 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 ARMCX4Q5H9R4 360 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 FAM209AQ5JX71 171 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 WDR88Q6ZMY6 472 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 MAVSQ7Z434 540 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 CROCCP2Q86T23 111 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 KRT73Q86Y46 540 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 LRRC17Q8N6Y2 441 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 OR1J2Q8NGS2 313 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 OR5J2Q8NH18 312 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 OR6X1Q8NH79 312 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 NFKBIDQ8NI38 313 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 ST7LQ8TDW4 575 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 GTF2H4Q92759 462 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 ZNF566Q969W8 418 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 DUX5Q96PT3 197 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 OR52B2Q96RD2 323 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 TMEM43Q9BTV4 400 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 SPATA5L1Q9BVQ7 753 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 RSPO3Q9BXY4 272 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-220ENST00000464800 LRMDAQ9H2I8 198 aa12.41□□□□□ -0.42
MCF2L-220ENST00000464800 UNKLQ9H9P5 680 aaKnown RBP12.41□□□□□ -0.42
MCF2L-220ENST00000464800 IQCMA0A1B0GVH7 501 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 ZNF500O60304 480 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-220ENST00000464800 MFN2O95140 757 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 ZNF81P51508 661 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 PLP2Q04941 152 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 MIDNQ504T8 468 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms