RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PRRC1Q96M27 445 aa22.33■■□□□ 1.17
U2AF1-206ENST00000464750 INIPQ9NRY2 104 aa22.33■■□□□ 1.17
U2AF1-206ENST00000464750 CMAHPQ9Y471 501 aa22.33■■□□□ 1.17
U2AF1-206ENST00000464750 SPEF1Q9Y4P9 236 aa22.33■■□□□ 1.17
U2AF1-206ENST00000464750 LOC390937A0A1W2PQ73 354 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 TMEM129A0AVI4 362 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 PIP5K1CO60331 668 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 OR8G3PP0DMU2 310 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 COX4I1P13073 169 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 DAP3P51398 398 aaKnown RBP22.32■■□□□ 1.16
U2AF1-206ENST00000464750 SELENOWP63302 87 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 RUNX1T1Q06455 604 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 HDDC2Q7Z4H3 204 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 MOSPD2Q8NHP6 518 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 ASB10Q8WXI3 467 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 ZNF347Q96SE7 839 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 A4GNTQ9UNA3 340 aa22.32■■□□□ 1.16
U2AF1-206ENST00000464750 SH3PXD2BA1X283 911 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 CCDC22O60826 627 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 FARS2O95363 451 aaKnown RBP22.31■■□□□ 1.16
U2AF1-206ENST00000464750 ERCC1P07992 297 aaPredicted RBP22.31■■□□□ 1.16
U2AF1-206ENST00000464750 ZNF16P17020 682 aaPredicted RBP22.31■■□□□ 1.16
U2AF1-206ENST00000464750 NR4A2P43354 598 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 MYBPC1Q00872 1141 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 GALK2Q01415 458 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 LIPEQ05469 1076 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 ST3GAL3Q11203 375 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 MSMPQ1L6U9 139 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 HIPK1Q86Z02 1210 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 SLC15A3Q8IY34 581 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 ZCCHC24Q8N2G6 241 aaKnown RBP22.31■■□□□ 1.16
U2AF1-206ENST00000464750 LIPHQ8WWY8 451 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 LZICQ8WZA0 190 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 MCHR2Q969V1 340 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 MRPL24Q96A35 216 aaKnown RBP22.31■■□□□ 1.16
U2AF1-206ENST00000464750 SH3GL3Q99963 347 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 MALRD1Q5VYJ5 2156 aa22.31■■□□□ 1.16
U2AF1-206ENST00000464750 IGHV4-31P0DP07 118 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 IFNA8P32881 189 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 SLC7A2P52569 658 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 LSM11P83369 360 aaKnown RBP eCLIP22.3■■□□□ 1.16
U2AF1-206ENST00000464750 HIST3H3Q16695 136 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 GKAP1Q5VSY0 366 aaPredicted RBP22.3■■□□□ 1.16
U2AF1-206ENST00000464750 VTCN1Q7Z7D3 282 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 ZNF584Q8IVC4 421 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 SYT14Q8NB59 555 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 OR4K5Q8NGD3 323 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 NEU4Q8WWR8 484 aaPredicted RBP22.3■■□□□ 1.16
U2AF1-206ENST00000464750 FOXN4Q96NZ1 517 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 SEPHS2Q99611 448 aa22.3■■□□□ 1.16
U2AF1-206ENST00000464750 MRPL13Q9BYD1 178 aaKnown RBP22.3■■□□□ 1.16
U2AF1-206ENST00000464750 MRPL37Q9BZE1 423 aaKnown RBP22.3■■□□□ 1.16
U2AF1-206ENST00000464750 CENPBD1B2RD01 187 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 TRMUO75648 421 aaKnown RBP22.29■■□□□ 1.16
U2AF1-206ENST00000464750 SERPINA5P05154 406 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 IGFBP1P08833 259 aaPredicted RBP22.29■■□□□ 1.16
U2AF1-206ENST00000464750 TSPAN19P0C672 248 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 ACADSP16219 412 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 LSP1P33241 339 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 GLRXP35754 106 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 ZNF84P51523 738 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 RPS23P62266 143 aaKnown RBP22.29■■□□□ 1.16
U2AF1-206ENST00000464750 CYB5R2Q6BCY4 276 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 BPESC1Q9GZL8 116 aa22.29■■□□□ 1.16
U2AF1-206ENST00000464750 CXCR6O00574 342 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 NME4O00746 187 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 IFNW1P05000 195 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 ADRA2AP08913 450 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 IFI30P13284 250 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 DAOP14920 347 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 YAP1P46937 504 aaKnown RBP22.28■■□□□ 1.16
U2AF1-206ENST00000464750 FXNQ16595 210 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 ARMC4Q5T2S8 1044 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 SLC16A14Q7RTX9 510 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 TREML1Q86YW5 311 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 OFCC1Q8IZS5 231 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 HOPXQ9BPY8 73 aaPredicted RBP22.28■■□□□ 1.16
U2AF1-206ENST00000464750 RNF121Q9H920 327 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 STX18Q9P2W9 335 aaKnown RBP22.28■■□□□ 1.16
U2AF1-206ENST00000464750 SLC7A8Q9UHI5 535 aa22.28■■□□□ 1.16
U2AF1-206ENST00000464750 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.28■■□□□ 1.166e-8■■■□□ 16.7
U2AF1-206ENST00000464750 IGHV4-61A0A0C4DH41 118 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 GSTA4O15217 222 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 STAMBPO95630 424 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 ZNF682O95780 498 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 FUT4P22083 530 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 EVX1P49640 407 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 GZMKP49863 264 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 ATRQ13535 2644 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 CHRFAM7AQ494W8 412 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 SLC36A2Q495M3 483 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 NRN1LQ496H8 165 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 IQCCQ4KMZ1 466 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 C8orf82Q6P1X6 216 aaPredicted RBP22.27■■□□□ 1.16
U2AF1-206ENST00000464750 TMEM53Q6P2H8 277 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 DPPA2Q7Z7J5 298 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 GEMIN6Q8WXD5 167 aaKnown RBP22.27■■□□□ 1.16
U2AF1-206ENST00000464750 BPIFA2Q96DR5 249 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 SYT3Q9BQG1 590 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 TPK1Q9H3S4 243 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms