RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ARHGDIGQ99819 225 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 PKP2Q99959 881 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 TRIM2Q9C040 744 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 MMADHCQ9H3L0 296 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 GORASP2Q9H8Y8 452 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 NTN4Q9HB63 628 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 PNPLA3Q9NST1 481 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 MAN2C1Q9NTJ4 1040 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 NDE1Q9NXR1 346 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 NDUFAF4Q9P032 175 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 PROCRQ9UNN8 238 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ANGPT4Q9Y264 503 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 CARD8Q9Y2G2 431 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 KLF13Q9Y2Y9 288 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 LIPGQ9Y5X9 500 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 HRNRQ86YZ3 2850 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 NCKAP5O14513 1909 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 A0A0G2JPF8 293 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DHRS12A0PJE2 317 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CFAP73A6NFT4 308 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SERINC4A6NH21 518 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OR6C70A6NIJ9 312 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DUXAA6NLW8 204 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CPSF4LA6NMK7 179 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HNRNPCL2B2RXH8 293 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HNRNPCL3B7ZW38 293 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 C5orf58C9J3I9 102 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 NPIPA2E9PIF3 369 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 NPIPA3F8WFD2 350 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TFECO14948 347 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ACOX3O15254 700 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 EFNA2O43921 213 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PIP5K1CO60331 668 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CDC40O60508 579 aaKnown RBP eCLIP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 FKBP6O75344 327 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 STX11O75558 287 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PDE9AO76083 593 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 GLSO94925 669 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ANGPTL1O95841 491 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 LGI1O95970 557 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 NGFRP08138 427 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HNRNPCL4P0DMR1 293 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ETS2P15036 469 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 EGR1P18146 543 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 FUT1P19526 365 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TBXA2RP21731 343 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SHC1P29353 583 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 IL12BP29460 328 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CEACAM8P31997 349 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RYKP34925 604 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 MAGEA2P43356 314 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RASSF2P50749 326 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SSR4P51571 173 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PNLIPRP2P54317 469 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SELENOWP63302 87 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 FOXO1Q12778 655 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TRAP1Q12931 704 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 GANABQ14697 944 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ZNHIT3Q15649 155 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DECR1Q16698 335 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 Q5PR19 223 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ATAD3BQ5T9A4 648 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PODNL1Q6PEZ8 512 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 BHLHB9Q6PI77 547 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TBPL2Q6SJ96 375 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PLXDC2Q6UX71 529 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TRILQ7L0X0 811 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ARMC8Q8IUR7 673 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 NKAIN4Q8IVV8 208 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CYP4Z2PQ8N1L4 340 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ARHGAP24Q8N264 748 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OR2M3Q8NG83 312 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OR4C15Q8NGM1 316 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SLC26A7Q8TE54 656 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PAQR8Q8TEZ7 354 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DUSP19Q8WTR2 217 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SLC47A1Q96FL8 570 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PYURFQ96I23 114 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF347Q96SE7 839 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SECISBP2Q96T21 854 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 GPA33Q99795 319 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SH3GL1Q99961 368 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PRSS27Q9BQR3 290 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 FUZQ9BT04 418 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DEFB127Q9H1M4 99 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SEMA6AQ9H2E6 1030 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RAD21L1Q9H4I0 556 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 S100A14Q9HCY8 104 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 EXD2Q9NVH0 621 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 MED11Q9P086 117 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 B4GALT7Q9UBV7 327 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RIMS3Q9UJD0 308 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ICAM5Q9UMF0 924 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 A4GNTQ9UNA3 340 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 AURKCQ9UQB9 309 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 LIPT1Q9Y234 373 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 YARS2Q9Y2Z4 477 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SH3GLB1Q9Y371 365 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PCDHGB3Q9Y5G1 929 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HCFC1P51610 2035 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms