RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 NXNL2Q5VZ03 156 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 SLC25A47Q6Q0C1 308 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 LINGO2Q7L985 606 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 JAZF1Q86VZ6 243 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 MCEMP1Q8IX19 187 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 GCNT2Q8N0V5 402 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 SYT14Q8NB59 555 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 NAXEQ8NCW5 288 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 NOXO1Q8NFA2 376 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 ZFP3Q96NJ6 502 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 TSSK2Q96PF2 358 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 VKORC1Q9BQB6 163 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 SYT4Q9H2B2 425 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 PLCXD1Q9NUJ7 323 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 ASB6Q9NWX5 421 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 B9D1Q9UPM9 204 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 LRCH1Q9Y2L9 728 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 FKBP7Q9Y680 259 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 FREM1Q5H8C1 2179 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 CCDC182A6NF36 153 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 MRPL33O75394 65 aaKnown RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 UPK3AO75631 287 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 RENP00797 406 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 CTLA4P16410 223 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 SPI1P17947 270 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 PAICSP22234 425 aaKnown RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 SLC15A1P46059 708 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 OR3A2P47893 321 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 CXCR4P61073 352 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 LGALS3BPQ08380 585 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 EIF2S3LQ2VIR3 472 aaKnown RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 TSPO2Q5TGU0 170 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 UGT2A3Q6UWM9 527 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 GALNT11Q8NCW6 608 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 OR9Q1Q8NGQ5 310 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 FNDC8Q8TC99 324 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 KISS1RQ969F8 398 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 MCHR2Q969V1 340 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 RBP7Q96R05 134 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 TEAD3Q99594 435 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 SRA1Q9HD15 236 aaKnown RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 RPRD1BQ9NQG5 326 aaKnown RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 PLSCR4Q9NRQ2 329 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 MRPS18AQ9NVS2 196 aaKnown RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 CLN6Q9NWW5 311 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 DNAJC27Q9NZQ0 273 aa12.68□□□□□ -0.38
COL6A1-202ENST00000463060 RP1L1Q8IWN7 2480 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-202ENST00000463060 OR6C65A6NJZ3 312 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 RPL36A-HNRNPH2H7BZ11 118 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 PRODHO43272 600 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 SLC16A7O60669 478 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 SLC43A1O75387 559 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 IL2RAP01589 272 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 PRB1P04280 392 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 QDPRP09417 244 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 TMIGD3P0DMS9 266 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-202ENST00000463060 HTR1FP30939 366 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 FMO3P31513 532 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 CSNK1A1P48729 337 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 CLRN1P58418 232 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 FMODQ06828 376 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 PMPCAQ10713 525 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 MRPL49Q13405 166 aaKnown RBP12.67□□□□□ -0.38
COL6A1-202ENST00000463060 ETFDHQ16134 617 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 SLC35D3Q5M8T2 416 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 C10orf128Q5T292 105 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 CARD17Q5XLA6 110 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 FOXL2NBQ6ZUU3 175 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 MEPCEQ7L2J0 689 aaKnown RBP12.67□□□□□ -0.38
COL6A1-202ENST00000463060 BTLAQ7Z6A9 289 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 OR6K3Q8NGY3 331 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 STARD4Q96DR4 205 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 ZNF837Q96EG3 531 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-202ENST00000463060 Q96MT0 163 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 RACGAP1Q9H0H5 632 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 MARCH7Q9H992 704 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 SLC7A10Q9NS82 523 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 HAO2Q9NYQ3 351 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 MOKQ9UQ07 419 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 OSGIN2Q9Y236 505 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 MEMO1Q9Y316 297 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 EMC9Q9Y3B6 208 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 UGT2A1Q9Y4X1 527 aa12.67□□□□□ -0.38
COL6A1-202ENST00000463060 FASNP49327 2511 aaKnown RBP12.67□□□□□ -0.38
COL6A1-202ENST00000463060 A0A0G2JNJ9 132 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 TRIM64A6NGJ6 449 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 GLCEO94923 617 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 IL18BPO95998 194 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 GYPBP06028 91 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 CCDC159P0C7I6 412 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 CTSSP25774 331 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 CRABP1P29762 137 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 CSNK2BP67870 215 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 TLE1Q04724 770 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 TMED1Q13445 227 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 APOFQ13790 326 aa12.66□□□□□ -0.38
COL6A1-202ENST00000463060 STK11Q15831 433 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms