RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 CD14P08571 375 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 B4GALT1P15291 398 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 CD53P19397 219 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 CAPZA2P47755 286 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 FXYD6P3P58550 94 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 SPOCK1Q08629 439 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 THSD4Q6ZMP0 1018 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 C20orf204Q6ZNR8 217 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 SPATA24Q86W54 205 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 OR4C15Q8NGM1 316 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 NMD3Q96D46 503 aaKnown RBP17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 CHID1Q9BWS9 393 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 LRMDAQ9H2I8 198 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 VNN3Q9NY84 501 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 CRNNQ9UBG3 495 aaPredicted RBP17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 ADAM18Q9Y3Q7 739 aa17.49■□□□□ 0.39
SNAPC3-204ENST00000461041 IGHV1-18A0A0C4DH31 117 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 A6NIZ1 184 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 FPR3P25089 353 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 GSSP48637 474 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF133P52736 654 aaPredicted RBP17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 RAP1BP61224 184 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 RAP1AP62834 184 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 CD47Q08722 323 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 PPP1R8Q12972 351 aaKnown RBP17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF672Q499Z4 452 aaPredicted RBP17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 C1orf94Q6P1W5 598 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 PGBD2Q6P3X8 592 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 LINC00471Q8N535 108 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 ARIH2OSQ8N7S6 290 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF611Q8N823 705 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 GNPDA2Q8TDQ7 276 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 RADILQ96JH8 1075 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 SLC38A2Q96QD8 506 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 GPX7Q96SL4 187 aaPredicted RBP17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 ALG12Q9BV10 488 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 MMADHCQ9H3L0 296 aaPredicted RBP17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 REEP1Q9H902 201 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 MOV10Q9HCE1 1003 aaKnown RBP17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 TMEM38BQ9NVV0 291 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 IL20RAQ9UHF4 553 aa17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 SAMHD1Q9Y3Z3 626 aaKnown RBP17.48■□□□□ 0.39
SNAPC3-204ENST00000461041 SPG11Q96JI7 2443 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 TCRBV3S1A0A5B6 114 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 SLC2A10O95528 541 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 NR2C1P13056 603 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 CBR1P16152 277 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 HOXB6P17509 224 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF84P51523 738 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 CDH11P55287 796 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 FMODQ06828 376 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 C3orf36Q3SXR2 165 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 C10orf128Q5T292 105 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 SMARCD3Q6STE5 483 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 SLC22A25Q6T423 547 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 FAM122BQ7Z309 247 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 MDP1Q86V88 176 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 SLC22A24Q8N4F4 322 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 CLDN22Q8N7P3 220 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 FAM169BQ8N8A8 192 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 OR9Q2Q8NGE9 314 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 FBXW5Q969U6 566 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 MBD6Q96DN6 1003 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 Q96M85 177 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 SMURF2Q9HAU4 748 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 NRIP3Q9NQ35 241 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 B3GNT2Q9NY97 397 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF224Q9NZL3 707 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 GRHPRQ9UBQ7 328 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 U3KQV3 271 aa17.47■□□□□ 0.39
SNAPC3-204ENST00000461041 IGKV1D-43A0A0B4J1Z2 117 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 ARHGEF9O43307 516 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 CCNB2O95067 398 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 CST1P01037 141 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 IGKV3-15P01624 115 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 IGLV1-44P01699 117 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 HLA-HP01893 362 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 CD79AP11912 226 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 ERFP50548 548 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 TSPAN31Q12999 210 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 MESTQ5EB52 335 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 THEM4Q5T1C6 240 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 SLC25A47Q6Q0C1 308 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 DPY19L2P2Q6ZN68 376 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 SKA3Q8IX90 412 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 DEPDC4Q8N2C3 294 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 FANK1Q8TC84 345 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 NANOS1Q8WY41 292 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 HTRA1Q92743 480 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 ZNF570Q96NI8 536 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 RBP7Q96R05 134 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 CCL19Q99731 98 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 OR52D1Q9H346 318 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 NOX3Q9HBY0 568 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 CSMD1Q96PZ7 3565 aa17.46■□□□□ 0.39
SNAPC3-204ENST00000461041 ENTPD5O75356 428 aa17.45■□□□□ 0.38
SNAPC3-204ENST00000461041 CELA3BP08861 270 aa17.45■□□□□ 0.38
SNAPC3-204ENST00000461041 CECR9P0C854 216 aa17.45■□□□□ 0.38
SNAPC3-204ENST00000461041 OR8G3PP0DMU2 310 aa17.45■□□□□ 0.38
SNAPC3-204ENST00000461041 SDHAP31040 664 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms