RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 GNGT2O14610 69 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SMAD7O15105 426 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 HEXAP06865 529 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 NR2C1P13056 603 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ACADSP16219 412 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 UBE2NP61088 152 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 RPL27P61353 136 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ARF1P84077 181 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MELKQ14680 651 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SEC23BQ15437 767 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 FAM205BPQ63HN1 556 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MEX3DQ86XN8 651 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR13C2Q8NGS9 318 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MAGEE2Q8TD90 523 aaPredicted RBP11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 GNPDA2Q8TDQ7 276 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CANT1Q8WVQ1 401 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TMEM54Q969K7 222 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CHID1Q9BWS9 393 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 LRMDAQ9H2I8 198 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 REEP1Q9H902 201 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SLC7A8Q9UHI5 535 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 POU2F3Q9UKI9 436 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SLC25A15Q9Y619 301 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 A6NIZ1 184 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ZNF99A8MXY4 864 aaPredicted RBP11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 CDC42EP2O14613 210 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 PTP4A3O75365 173 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 TRMUO75648 421 aaKnown RBP11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 CIB2O75838 187 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 CCNB2O95067 398 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 NDUFB2O95178 105 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 CST1P01037 141 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 PTAFRP25105 342 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 RAP1BP61224 184 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 RAP1AP62834 184 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 Q71RC1 249 aaPredicted RBP11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 LINGO2Q7L985 606 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ADGRG5Q8IZF4 528 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 PIAS4Q8N2W9 510 aaPredicted RBP11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 FNDC8Q8TC99 324 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ASB10Q8WXI3 467 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 BCL2L2Q92843 193 aaPredicted RBP11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 RBP7Q96R05 134 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 SMR3AQ99954 134 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 CISD1Q9NZ45 108 aaKnown RBP11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 GRHPRQ9UBQ7 328 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ZNF346Q9UL40 294 aaKnown RBP11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 LYVE1Q9Y5Y7 322 aa11.58□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ARID1AO14497 2285 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 SETD2Q9BYW2 2564 aaPredicted RBP11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 RAI1Q7Z5J4 1906 aaPredicted RBP11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 TCRBV3S1A0A5B6 114 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ABCD4O14678 606 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 IGHMP01871 453 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 CD14P08571 375 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 QDPRP09417 244 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 PGA4P0DJD7 388 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 PGA3P0DJD8 388 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ACVR1BP36896 505 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 LIMS1P48059 325 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ZNF84P51523 738 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 CDH11P55287 796 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 TSPAN31Q12999 210 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 TOP3AQ13472 1001 aaPredicted RBP11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 TBRG1Q3YBR2 411 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 HIKESHIQ53FT3 197 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 PHYHD1Q5SRE7 291 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ARMC4Q5T2S8 1044 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 C1orf146Q5VVC0 180 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 AGAP6Q5VW22 663 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 C1orf94Q6P1W5 598 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 SLC22A25Q6T423 547 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ZNF813Q6ZN06 617 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ZER1Q7Z7L7 766 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 WDR31Q8NA23 367 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 LRRC75AQ8NAA5 344 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 KBTBD8Q8NFY9 601 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 IGFBPL1Q8WX77 278 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 RSRC1Q96IZ7 334 aaKnown RBP11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ALG12Q9BV10 488 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 MRPL13Q9BYD1 178 aaKnown RBP11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 BARX1Q9HBU1 254 aaPredicted RBP11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 SIGLEC7Q9Y286 467 aa11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 SAMHD1Q9Y3Z3 626 aaKnown RBP11.57□□□□□ -0.56
RAB11FIP3-207ENST00000461009 MTORP42345 2549 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 A0A096LPE4 126 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 ARPC4-TTLL3A0A0A6YYG9 625 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 A0A1W2PPZ6 126 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 A0A1W2PR80 420 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 TRIM64A6NGJ6 449 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 TRIM64BA6NI03 449 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 XKRYO14609 159 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 DHHO43323 396 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 AHCYL1O43865 530 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 MGRN1O60291 552 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 LY6G6DO95868 133 aa11.56□□□□□ -0.56
RAB11FIP3-207ENST00000461009 BMP4P12644 408 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms