RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TMBIM4Q9HC24 238 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 SLCO1B3Q9NPD5 702 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 TMEM38BQ9NVV0 291 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 NKIRAS2Q9NYR9 191 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 TREM2Q9NZC2 230 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 MYEF2Q9P2K5 600 aaKnown RBP18.44■□□□□ 0.54
CPNE1-220ENST00000458038 DHHO43323 396 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 RP2O75695 350 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 SNAP29O95721 258 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 NAT2P11245 290 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 RAD52P43351 418 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 KLF3P57682 345 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-220ENST00000458038 PCBP3P57721 371 aaKnown RBP18.43■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF74Q16587 644 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 SLC36A2Q495M3 483 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 AGKQ53H12 422 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 TTC33Q6PID6 262 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-220ENST00000458038 LRFN4Q6PJG9 635 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 WDR88Q6ZMY6 472 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 USP43Q70EL4 1123 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 CARM1Q86X55 608 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 SLC30A8Q8IWU4 369 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF519Q8TB69 540 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 SYNPRQ8TBG9 265 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 C11orf40Q8WZ69 217 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 MPP4Q96JB8 637 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 WFDC6Q9BQY6 131 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 BCL2L14Q9BZR8 327 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 NARFLQ9H6Q4 476 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 CDH20Q9HBT6 801 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 HINT3Q9NQE9 182 aaKnown RBP18.43■□□□□ 0.54
CPNE1-220ENST00000458038 TAS2R5Q9NYW4 299 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF229Q9UJW7 825 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 FZR1Q9UM11 496 aa18.43■□□□□ 0.54
CPNE1-220ENST00000458038 IGLV3-9A0A075B6K5 115 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 C17orf100A8MU93 164 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 FAM157AC9JC47 383 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 RNF13O43567 381 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 ERLIN1O75477 346 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 NCR1O76036 304 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 VENTXO95231 258 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 PLP2Q04941 152 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 DUSP7Q16829 419 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 RUNDC3AQ59EK9 446 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 ENTPD8Q5MY95 495 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 ACSM5Q6NUN0 579 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 DLEU7Q6UYE1 221 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 SMYD1Q8NB12 490 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 SEMA6DQ8NFY4 1073 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 LRRC8CQ8TDW0 803 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 CPPED1Q9BRF8 314 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-220ENST00000458038 RNF121Q9H920 327 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 TAAR3PQ9P1P4 343 aa18.42■□□□□ 0.54
CPNE1-220ENST00000458038 TRAPPC13A5PLN9 417 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 CENPBD1B2RD01 187 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 M0QX08 132 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 CH25HO95992 272 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 BCL10O95999 233 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 MT-ND5P03915 603 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 PATE4P0C8F1 98 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 PGA4P0DJD7 388 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 PGA3P0DJD8 388 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 CFPP27918 469 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 TBC1D28Q2M2D7 210 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 HDDC2Q7Z4H3 204 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 FGFBP3Q8TAT2 258 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 ADAMTS16Q8TE57 1224 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 JMJD8Q96S16 334 aa18.41■□□□□ 0.54
CPNE1-220ENST00000458038 IQCMA0A1B0GVH7 501 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 M0R3H8 397 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 PNPP00491 289 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 IGHG1P01857 330 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 QDPRP09417 244 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 CRYBB2P43320 205 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 COMPP49747 757 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF84P51523 738 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 UCP2P55851 309 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 RUNX1T1Q06455 604 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 CYP51A1Q16850 503 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 FAHD2BQ6P2I3 314 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-220ENST00000458038 SLC16A14Q7RTX9 510 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 PATL1Q86TB9 770 aaKnown RBP18.4■□□□□ 0.54
CPNE1-220ENST00000458038 PTOV1Q86YD1 416 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 OR6T1Q8NGN1 323 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 RAB39BQ96DA2 213 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 FAHD2AQ96GK7 314 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 SH3GL3Q99963 347 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 EBF4Q9BQW3 602 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF426Q9BUY5 554 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 PCDHAC1Q9H158 963 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 LPAR2Q9HBW0 351 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 LEF1Q9UJU2 399 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-220ENST00000458038 PCDHB10Q9UN67 800 aa18.4■□□□□ 0.54
CPNE1-220ENST00000458038 CPSF4LA6NMK7 179 aaKnown RBP18.39■□□□□ 0.53
CPNE1-220ENST00000458038 WNT9BO14905 357 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 LCKP06239 509 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 ASAH2BP0C7U1 165 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 FAM157BP0CG42 384 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 MAGEB1P43366 347 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms