RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 OXGR1Q96P68 337 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 ALG12Q9BV10 488 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 MRPL13Q9BYD1 178 aaKnown RBP7.76□□□□□ -1.17
RIF1-208ENST00000457745 RERGLQ9H628 205 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 ZNF71Q9NQZ8 489 aaPredicted RBP7.76□□□□□ -1.17
RIF1-208ENST00000457745 ERVK13-1Q9NX77 482 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 GRHPRQ9UBQ7 328 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 CLEC4AQ9UMR7 237 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 TRAPPC4Q9Y296 219 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 B3GALT5Q9Y2C3 310 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 GRIP1Q9Y3R0 1128 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 UGT2A1Q9Y4X1 527 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 PCDHGA9Q9Y5G4 932 aaKnown RBP7.76□□□□□ -1.17
RIF1-208ENST00000457745 ARHGAP21Q5T5U3 1957 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 MED12LQ86YW9 2145 aa7.76□□□□□ -1.17
RIF1-208ENST00000457745 TRAV17A0A0B4J275 112 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 A0A1W2PQL4 384 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 NPIPA5E9PKD4 350 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ERVH48-1M5A8F1 160 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 PSMD9O00233 223 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 IDH3BO43837 385 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 SLC16A7O60669 478 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ZNF432O94892 652 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 GLCEO94923 617 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 OR6A2O95222 327 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ATE1O95260 518 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 RAB36O95755 333 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 TGM6O95932 706 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 IFNGP01579 166 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 IGHG3P01860 377 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 PSMB9P28065 219 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 CDAP32320 146 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 CLK1P49759 484 aaKnown RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 GTF2A1P52655 376 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 SLC16A1P53985 500 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 CXADRP78310 365 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ZNF169Q14929 603 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.75□□□□□ -1.17
RIF1-208ENST00000457745 ANKDD1AQ495B1 522 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 GPR139Q6DWJ6 353 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 LRFN4Q6PJG9 635 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 SLC25A47Q6Q0C1 308 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ZBTB46Q86UZ6 589 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 JAZF1Q86VZ6 243 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ATCAYQ86WG3 371 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 CLVS1Q8IUQ0 354 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 GID4Q8IVV7 300 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 UEVLDQ8IX04 471 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 SLC35F2Q8IXU6 374 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 TMEM178AQ8NBL3 297 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 NOXO1Q8NFA2 376 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 OR6K6Q8NGW6 343 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 FNDC9Q8TBE3 224 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 SPRYD4Q8WW59 207 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 MYDGFQ969H8 173 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ABTB1Q969K4 478 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 FAM122AQ96E09 287 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 Q96MT0 163 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 OR2M2Q96R28 347 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 FUNDC2Q9BWH2 189 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 ACKR4Q9NPB9 350 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 WARS2Q9UGM6 360 aaKnown RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 BLOC1S6Q9UL45 172 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.75□□□□□ -1.17
RIF1-208ENST00000457745 NPIPA1Q9UND3 350 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 COA3Q9Y2R0 106 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 SNX5Q9Y5X3 404 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 FLVCR1Q9Y5Y0 555 aa7.75□□□□□ -1.17
RIF1-208ENST00000457745 SPIN1Q9Y657 262 aaPredicted RBP7.75□□□□□ -1.17
RIF1-208ENST00000457745 CHD8Q9HCK8 2581 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 DMXL2Q8TDJ6 3036 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 NCOA6Q14686 2063 aaPredicted RBP7.74□□□□□ -1.17
RIF1-208ENST00000457745 TRGV5A0A0B4J1U4 118 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 A0A1B0GTH9 108 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 PNMA8CA0A1B0GUJ8 204 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 LOC102725191A0A1B0GVB3 256 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 A0A1W2PRG6 482 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 UPK3AO75631 287 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 ABHD16AO95870 558 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 BCL10O95999 233 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 SNRPBP14678 240 aaKnown RBP7.74□□□□□ -1.17
RIF1-208ENST00000457745 ZNF24P17028 368 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 GADD45AP24522 165 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 GTF2E2P29084 291 aaKnown RBP7.74□□□□□ -1.17
RIF1-208ENST00000457745 MAP2K6P52564 334 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 CARD18P57730 90 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 RAC3P60763 192 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 RPS25P62851 125 aaKnown RBP7.74□□□□□ -1.17
RIF1-208ENST00000457745 CSNK2BP67870 215 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 RAB40BQ12829 278 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 INSL4Q14641 139 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 SLC10A1Q14973 349 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 MFSD13AQ14CX5 517 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 HIST3H3Q16695 136 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 TSTQ16762 297 aaKnown RBP7.74□□□□□ -1.17
RIF1-208ENST00000457745 CNPY1Q3B7I2 92 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 TP53I3Q53FA7 332 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 EMC4Q5J8M3 183 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 ZNF684Q5T5D7 378 aa7.74□□□□□ -1.17
RIF1-208ENST00000457745 BORAQ6PGQ7 559 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms