RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 AURKCQ9UQB9 309 aa20.19■□□□□ 0.82
CBX3-204ENST00000456948 A6NIZ1 184 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 SEC14L2O76054 403 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 IGLV1-44P01699 117 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 FABP3P05413 133 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 B4GALT1P15291 398 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 MAKP20794 623 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 RPL4P36578 427 aaKnown RBP20.18■□□□□ 0.82
CBX3-204ENST00000456948 IFNGR2P38484 337 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 IDH3GP51553 393 aaPredicted RBP20.18■□□□□ 0.82
CBX3-204ENST00000456948 CTXN1P60606 82 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 RAP1BP61224 184 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 RPL27P61353 136 aaKnown RBP20.18■□□□□ 0.82
CBX3-204ENST00000456948 RAP1AP62834 184 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 NAAAQ02083 359 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 NPRL3Q12980 569 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 NRN1LQ496H8 165 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 PODNL1Q6PEZ8 512 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 LRFN4Q6PJG9 635 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 TBPL2Q6SJ96 375 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 MDP1Q86V88 176 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 SYT14Q8NB59 555 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 WFDC11Q8NEX6 87 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 NOXO1Q8NFA2 376 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 SLC7A13Q8TCU3 470 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 MCHR2Q969V1 340 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 TNFRSF13CQ96RJ3 184 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 BDH2Q9BUT1 245 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 C1orf21Q9H246 121 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 BARX1Q9HBU1 254 aaPredicted RBP20.18■□□□□ 0.82
CBX3-204ENST00000456948 TMCC3Q9ULS5 477 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 SPEF1Q9Y4P9 236 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 PMF1-BGLAPU3KQ54 211 aa20.18■□□□□ 0.82
CBX3-204ENST00000456948 ATP6V1G2-DDX39BF2Z307 99 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 OVOL3O00110 214 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 TRMUO75648 421 aaKnown RBP20.17■□□□□ 0.82
CBX3-204ENST00000456948 GADD45GO95257 159 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 CECR9P0C854 216 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 VLDLRP98155 873 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 CD47Q08722 323 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 TOP3AQ13472 1001 aaPredicted RBP20.17■□□□□ 0.82
CBX3-204ENST00000456948 ZBED5Q49AG3 693 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 TRPM8Q7Z2W7 1104 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 SLC22A24Q8N4F4 322 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 ALG12Q9BV10 488 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 MRPL13Q9BYD1 178 aaKnown RBP20.17■□□□□ 0.82
CBX3-204ENST00000456948 SMURF2Q9HAU4 748 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 IL1RAPQ9NPH3 570 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 TMEM38BQ9NVV0 291 aa20.17■□□□□ 0.82
CBX3-204ENST00000456948 FBXO9Q9UK97 447 aaPredicted RBP20.17■□□□□ 0.82
CBX3-204ENST00000456948 TRAV27A0A087WT01 109 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 HLA-HP01893 362 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 ACVR1BP36896 505 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 GPR4P46093 362 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 RAB1AP62820 205 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 SPIBQ01892 262 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 PIGFQ07326 219 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 HIST3H3Q16695 136 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 SLC36A2Q495M3 483 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 THEM4Q5T1C6 240 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 ARMC4Q5T2S8 1044 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 TMEM53Q6P2H8 277 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 DHFR2Q86XF0 187 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 FAM86B1Q8N7N1 296 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 GRHPRQ9UBQ7 328 aa20.16■□□□□ 0.82
CBX3-204ENST00000456948 XKRYO14609 159 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 KRT36O76013 467 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 PTHP01270 115 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 IGHMP01871 453 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 NPR2P20594 1047 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 PTDSS1P48651 473 aaKnown RBP20.15■□□□□ 0.82
CBX3-204ENST00000456948 RIPPLY3P57055 190 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 LSM11P83369 360 aaKnown RBP eCLIP20.15■□□□□ 0.82
CBX3-204ENST00000456948 TRIM25Q14258 630 aaKnown RBP20.15■□□□□ 0.82
CBX3-204ENST00000456948 TSEN54Q7Z6J9 526 aaKnown RBP20.15■□□□□ 0.82
CBX3-204ENST00000456948 OR13C2Q8NGS9 318 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 OR52J3Q8NH60 311 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 FAM46AQ96IP4 442 aaKnown RBP20.15■□□□□ 0.82
CBX3-204ENST00000456948 LRGUKQ96M69 825 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 SEPHS2Q99611 448 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 RNF121Q9H920 327 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 B3GNT2Q9NY97 397 aa20.15■□□□□ 0.82
CBX3-204ENST00000456948 ZNF346Q9UL40 294 aaKnown RBP20.15■□□□□ 0.82
CBX3-204ENST00000456948 DIRAS1O95057 198 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 CDKN1AP38936 164 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 RAB35Q15286 201 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 CYP2R1Q6VVX0 501 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 RINLQ6ZS11 566 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 SLC16A14Q7RTX9 510 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 ZDHHC21Q8IVQ6 265 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 WDFY1Q8IWB7 410 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 OR4K5Q8NGD3 323 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 DHRS1Q96LJ7 313 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 Q96MF0 132 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 CA10Q9NS85 328 aa20.14■□□□□ 0.81
CBX3-204ENST00000456948 AHCYL1O43865 530 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 PDE5AO76074 875 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 NDUFB2O95178 105 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 CD8AP01732 235 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 SEMG1P04279 462 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms