RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 FBXL3Q9UKT7 428 aa14.06□□□□□ -0.16
CPSF6-203ENST00000456847 HIF3AQ9Y2N7 669 aa14.06□□□□□ -0.16
CPSF6-203ENST00000456847 EFCAB9A8MZ26 197 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 B9A039 149 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 TRMUO75648 421 aaKnown RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 TCN1P20061 433 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 THBS4P35443 961 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 LSM11P83369 360 aaKnown RBP eCLIP14.05□□□□□ -0.165e-7■■■□□ 16.5
CPSF6-203ENST00000456847 MXRA7P84157 204 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 RUNX1T1Q06455 604 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 CD47Q08722 323 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 LAPTM4AQ15012 233 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 SWI5Q1ZZU3 235 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 LRFN4Q6PJG9 635 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 SKA3Q8IX90 412 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 ACOT11Q8WXI4 607 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 MCHR2Q969V1 340 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 POM121Q96HA1 1249 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 LRRC37BQ96QE4 947 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 VRK1Q99986 396 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 DENND2DQ9H6A0 471 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 ZNF442Q9H7R0 627 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 RNF121Q9H920 327 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 ZNF224Q9NZL3 707 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 TAGLN3Q9UI15 199 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 SAMD4AQ9UPU9 718 aaKnown RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 FAM32AQ9Y421 112 aaKnown RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 ENPP4Q9Y6X5 453 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 TRAV27A0A087WT01 109 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 CENPBD1B2RD01 187 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 FFAR1O14842 300 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 PATE4P0C8F1 98 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 ZNF14P17017 642 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-203ENST00000456847 NPR2P20594 1047 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 MAKP20794 623 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 FUT4P22083 530 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 EFNA4P52798 201 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 DSCR9P59020 149 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 GALK2Q01415 458 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 RAB39AQ14964 217 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 MST1LQ2TV78 715 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 TMEM53Q6P2H8 277 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 IGFN1Q86VF2 1251 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 ZNF525Q8N782 197 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 OR4K5Q8NGD3 323 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 SH3GL3Q99963 347 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 TXNIPQ9H3M7 391 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 SPEF1Q9Y4P9 236 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 V9GYQ6 96 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 ARFGEF3Q5TH69 2177 aa14.05□□□□□ -0.16
CPSF6-203ENST00000456847 IGHV4-30-2A0A087WSY4 118 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 hCG_2039718K7EN88 272 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 TSPAN19P0C672 248 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 NR2C1P13056 603 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 HOXB4P17483 251 aaPredicted RBP14.04□□□□□ -0.16
CPSF6-203ENST00000456847 GPR4P46093 362 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 CTXN1P60606 82 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 PRKCDQ05655 676 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 TAF11Q15544 211 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 EFNB3Q15768 340 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 FGD3Q5JSP0 725 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 DNM1P46Q6ZS02 220 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 SLC16A14Q7RTX9 510 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 OAFQ86UD1 273 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 RNF113BQ8IZP6 322 aaKnown RBP14.04□□□□□ -0.16
CPSF6-203ENST00000456847 PGAM4Q8N0Y7 254 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 FAM156AQ8NDB6 213 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 OR13C2Q8NGS9 318 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 OR51A7Q8NH64 312 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 ARL8BQ9NVJ2 186 aa14.04□□□□□ -0.16
CPSF6-203ENST00000456847 A0A087WUU8 490 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 NPIPB13A6NJU9 1138 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 NPIPB4C9JG80 1138 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 SLC2A10O95528 541 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 TP53P04637 393 aaPredicted RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 CSF3P09919 207 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 PCSK6P29122 969 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 PPP2R2BQ00005 443 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 HIST3H3Q16695 136 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 SLC36A2Q495M3 483 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 ARMC4Q5T2S8 1044 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 GKAP1Q5VSY0 366 aaPredicted RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 MBOAT2Q6ZWT7 520 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 PIGWQ7Z7B1 504 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 FAM168AQ92567 244 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 SORCS2Q96PQ0 1159 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 MRPL13Q9BYD1 178 aaKnown RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 NDEL1Q9GZM8 345 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 PLK3Q9H4B4 646 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 ANKRD19PQ9H560 264 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 DYNLRB1Q9NP97 96 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 MAGEL2Q9UJ55 1249 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 LY6HO94772 140 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 PRSS23O95084 383 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 H1F0P07305 194 aaKnown RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 SLC9A3P48764 834 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 RPL27P61353 136 aaKnown RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 CARTPTQ16568 116 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 SAMD4BQ5PRF9 694 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms