RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 MPGP29372 298 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 CDAP32320 146 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 POLR2IP36954 125 aaKnown RBP12.34□□□□□ -0.43
TIMP1-205ENST00000456754 CD47Q08722 323 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 STK11Q15831 433 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 GABRA6Q16445 453 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 HIST3H3Q16695 136 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 KDM4DQ6B0I6 523 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 ACSM5Q6NUN0 579 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 ZDHHC13Q8IUH4 622 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 SDR9C7Q8NEX9 313 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 OR1K1Q8NGR3 316 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 TSSK2Q96PF2 358 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 NMNAT3Q96T66 252 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 PAPOLBQ9NRJ5 636 aaKnown RBP12.34□□□□□ -0.43
TIMP1-205ENST00000456754 TAS2R16Q9NYV7 291 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 NBPF19A0A087WUL8 3843 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 CIB4A0PJX0 185 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SLC22A23A1A5C7 686 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 TUBAL3A6NHL2 446 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 H3BN98 237 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 M0R129 80 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 DCTN6O00399 190 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 EI24O14681 340 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SIAH2O43255 324 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 CNOT4O95628 575 aaKnown RBP12.33□□□□□ -0.44
TIMP1-205ENST00000456754 TXNDC12O95881 172 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SCG5P05408 212 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 OSMP13725 252 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 B4GALT1P15291 398 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 CTLA4P16410 223 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SDHAP31040 664 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 ARHGDIAP52565 204 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 PPP2R2BQ00005 443 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 P2RY6Q15077 328 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 TAB1Q15750 504 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 ZNF362Q5T0B9 420 aaPredicted RBP12.33□□□□□ -0.44
TIMP1-205ENST00000456754 LPCAT4Q643R3 524 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SLC25A47Q6Q0C1 308 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 KLHL24Q6TFL4 600 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SEZ6L2Q6UXD5 910 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SVOPLQ8N434 492 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 CBR4Q8N4T8 237 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 WDR31Q8NA23 367 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 CYB561A3Q8NBI2 242 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 OR52E2Q8NGJ4 325 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 OR52N5Q8NH56 324 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 ZNRF4Q8WWF5 429 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 LRR1Q96L50 414 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 OSBPL10Q9BXB5 764 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 C1QTNF6Q9BXI9 259 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 SYT4Q9H2B2 425 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 GPR52Q9Y2T5 361 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 UGT2A1Q9Y4X1 527 aa12.33□□□□□ -0.44
TIMP1-205ENST00000456754 PRSS37A4D1T9 235 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 SH3D21A4FU49 640 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 OR6C68A6NDL8 312 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 FAM171A2A8MVW0 826 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 RPL36A-HNRNPH2H7BZ11 118 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 DHHO43323 396 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 PATE4P0C8F1 98 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 KIR2DL3P43628 341 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 RPS6KA3P51812 740 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 SORDQ00796 357 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.32□□□□□ -0.44
TIMP1-205ENST00000456754 COX10Q12887 443 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 GINS1Q14691 196 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 TAF11Q15544 211 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 LRRC36Q1X8D7 754 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 TBRG1Q3YBR2 411 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 LEG1Q6P5S2 330 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 OR52L1Q8NGH7 329 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 TEX47Q8TBZ9 253 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
TIMP1-205ENST00000456754 RERGLQ9H628 205 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 ZNF556Q9HAH1 456 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 NOX3Q9HBY0 568 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 KRT84Q9NSB2 600 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 NPAP1Q9NZP6 1156 aa12.32□□□□□ -0.44
TIMP1-205ENST00000456754 A6NIZ1 184 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
TIMP1-205ENST00000456754 ARPC3O15145 178 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 MPZL1O95297 269 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 IGFBP5P24593 272 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 PEX2P28328 305 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 NOS3P29474 1203 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 CRISP1P54107 249 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 RAP1BP61224 184 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 RAP1AP62834 184 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 DAG1Q14118 895 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 ZIK1Q3SY52 487 aaPredicted RBP12.31□□□□□ -0.44
TIMP1-205ENST00000456754 GPR139Q6DWJ6 353 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 C10orf67Q8IYJ2 551 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 LNX2Q8N448 690 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 SLC37A3Q8NCC5 494 aa12.31□□□□□ -0.44
TIMP1-205ENST00000456754 NPEPL1Q8NDH3 523 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms