RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 MYF5P13349 255 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 GDNFP39905 211 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 RAG2P55895 527 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 CBFBQ13951 182 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 SGCBQ16585 318 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 YOD1Q5VVQ6 348 aaPredicted RBP16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 PWWP2BQ6NUJ5 590 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 BTN2A1Q7KYR7 527 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 KMT5CQ86Y97 462 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 SPERTQ8NA61 448 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 GPR119Q8TDV5 335 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 MARVELD3Q96A59 401 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 CCDC74AQ96AQ1 378 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 OR2M2Q96R28 347 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 LIN7BQ9HAP6 207 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 IKZF2Q9UKS7 526 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 TMEM14AQ9Y6G1 99 aa16.61■□□□□ 0.25
SEMA3B-209ENST00000456560 ADAM10O14672 748 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 MT-ND4P03905 459 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 PDGFAP04085 211 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 P2RX1P51575 399 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 CCR6P51684 374 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 POLR2HP52434 150 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 CLDN12P56749 244 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 SNTB2Q13425 540 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 CD276Q5ZPR3 534 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 ADGRG3Q86Y34 549 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 OR11H4Q8NGC9 324 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 ZNF519Q8TB69 540 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 LRRC20Q8TCA0 184 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 DNASE2BQ8WZ79 361 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 DNAJA3Q96EY1 480 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 AMELYQ99218 206 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 SLITRK2Q9H156 845 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 TCF7L1Q9HCS4 588 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 TP53BP1Q12888 1972 aaPredicted RBP16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 TMED7-TICAM2A0A0A6YYA0 188 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 HSPB2A8KAH6 182 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 C11orf98E9PRG8 122 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 PHYHO14832 338 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 SUSD5O60279 629 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 DXOO77932 396 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 ZNF432O94892 652 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 NUDT14O95848 222 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 CXCL3P19876 107 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 SOX2P48431 317 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 STARD6P59095 220 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 HSPB2Q16082 182 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 LANCL3Q6ZV70 420 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 PRSS35Q8N3Z0 413 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 SLC25A36Q96CQ1 311 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 B9D1Q9UPM9 204 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 FOXJ3Q9UPW0 622 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 TMED7Q9Y3B3 224 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 FKBP7Q9Y680 259 aa16.6■□□□□ 0.25
SEMA3B-209ENST00000456560 FER1L5A0AVI2 2057 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 RP1P56715 2156 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 PCNX3Q9H6A9 2034 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 TEX51A0A1B0GUA7 166 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 SULT1B1O43704 296 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 ZNF254O75437 659 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 SLC25A12O75746 678 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 RPS27P42677 84 aaKnown RBP16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 PTH2RP49190 550 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 RPL27P61353 136 aaKnown RBP16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 COL28A1Q2UY09 1125 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 LINGO2Q7L985 606 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 OTOSQ8NHW6 89 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 THEM6Q8WUY1 208 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 SLC22A11Q9NSA0 550 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 FGF21Q9NSA1 209 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 PTTG3PQ9NZH4 202 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 CTSFQ9UBX1 484 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 ASXL3Q9C0F0 2248 aa16.59■□□□□ 0.25
SEMA3B-209ENST00000456560 A8MVM7 634 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 GABARAPH6UMI1 98 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 RAB40ALP0C0E4 278 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 H2AFB2P0C5Z0 115 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 POU4F3Q15319 338 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 ACKR1Q16570 336 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 GSG1Q2KHT4 349 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 FAM69AQ5T7M9 428 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 FDX2Q6P4F2 183 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 WDR74Q6RFH5 385 aaPredicted RBP16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 COX15Q7KZN9 410 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 DND1Q8IYX4 353 aaKnown RBP16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 OR10AC1Q8NH08 325 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 RAB40AQ8WXH6 277 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 NSMAFQ92636 917 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 DACT3Q96B18 629 aaPredicted RBP16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 KCNG2Q9UJ96 466 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 ING1Q9UK53 422 aaPredicted RBP16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 AUP1Q9Y679 476 aa16.58■□□□□ 0.25
SEMA3B-209ENST00000456560 ADAMTS20P59510 1910 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 PRSS37A4D1T9 235 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 TMEM212A6NML5 194 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 XKRYO14609 159 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 SYPP08247 313 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 CSRP1P21291 193 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 KIR3DL2P43630 455 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms