RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 CDKN2AP42771 156 aaKnown RBP13.78□□□□□ -0.2
VCX3B-204ENST00000453306 ARHGDIAP52565 204 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 SORDQ00796 357 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 FAM27E3Q08E93 113 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 TSC22D1Q15714 1073 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 SLC35F1Q5T1Q4 408 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 C22orf34Q6ZV56 151 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 PTCHD4Q6ZW05 846 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 PARP8Q8N3A8 854 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 ARIH2OSQ8N7S6 290 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 TMEM54Q969K7 222 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 APH1AQ96BI3 265 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
VCX3B-204ENST00000453306 PAPOLBQ9NRJ5 636 aaKnown RBP13.78□□□□□ -0.2
VCX3B-204ENST00000453306 TEX13CA0A0J9YWL9 993 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 A0A1W2PRG6 482 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 EEF1E1-BLOC1S5C9J1V9 151 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 H7C1C5 153 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 ARPC3O15145 178 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 EEF1E1O43324 174 aaKnown RBP13.77□□□□□ -0.21
VCX3B-204ENST00000453306 SLC2A10O95528 541 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 RAF1P04049 648 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 ACADSP16219 412 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 IGHV1-2P23083 117 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 SLC6A6P31641 620 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 GIPRP48546 466 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 LCN6P62502 163 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 CDK5Q00535 292 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 RIPK1Q13546 671 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 KEAP1Q14145 624 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 GINS1Q14691 196 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 TRIP10Q15642 601 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 HIST3H3Q16695 136 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 FBXW9Q5XUX1 488 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 PAMR1Q6UXH9 720 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 ZBTB49Q6ZSB9 765 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 ZNF100Q8IYN0 542 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 LNX2Q8N448 690 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 SYT14Q8NB59 555 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
VCX3B-204ENST00000453306 SLC25A44Q96H78 314 aaPredicted RBP13.77□□□□□ -0.21
VCX3B-204ENST00000453306 ERMAPQ96PL5 475 aaPredicted RBP13.77□□□□□ -0.21
VCX3B-204ENST00000453306 MBOAT4Q96T53 435 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 IFT27Q9BW83 186 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 PIGMQ9H3S5 423 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 PARPBPQ9NWS1 579 aa13.77□□□□□ -0.21
VCX3B-204ENST00000453306 ANKHD1Q8IWZ3 2542 aaKnown RBP13.77□□□□□ -0.21
VCX3B-204ENST00000453306 ATP6V1G2O95670 118 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 ITGA5P08648 1049 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 APEHP13798 732 aaKnown RBP13.76□□□□□ -0.21
VCX3B-204ENST00000453306 HIST1H1CP16403 213 aaKnown RBP13.76□□□□□ -0.21
VCX3B-204ENST00000453306 POU1F1P28069 291 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 ACVR1BP36896 505 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 CRISP1P54107 249 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 SLC34A1Q06495 639 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 OGFRL1Q5TC84 451 aaPredicted RBP13.76□□□□□ -0.21
VCX3B-204ENST00000453306 LINC00470Q9BZP3 86 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 SLCO5A1Q9H2Y9 848 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 ZNF556Q9HAH1 456 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 KRT84Q9NSB2 600 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 MALT1Q9UDY8 824 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 POFUT2Q9Y2G5 429 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 ARHGAP21Q5T5U3 1957 aa13.76□□□□□ -0.21
VCX3B-204ENST00000453306 ZNF726A6NNF4 738 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 H0YHG0 523 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 M0R3G1 203 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 DCTN6O00399 190 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 SLC43A1O75387 559 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 IGFBP5P24593 272 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 SDHAP31040 664 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 CCKARP32238 428 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 DAP3P51398 398 aaKnown RBP13.75□□□□□ -0.21
VCX3B-204ENST00000453306 ALDH3A2P51648 485 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 FMODQ06828 376 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 FAPQ12884 760 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 PTGES3Q15185 160 aaKnown RBP13.75□□□□□ -0.21
VCX3B-204ENST00000453306 ETFDHQ16134 617 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 PGGHGQ32M88 737 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 ZIK1Q3SY52 487 aaPredicted RBP13.75□□□□□ -0.21
VCX3B-204ENST00000453306 C9orf135Q5VTT2 229 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 STAC2Q6ZMT1 411 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 Q6ZT83 130 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 GALNT4Q8N4A0 578 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 NPEPL1Q8NDH3 523 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 OR4K13Q8NH42 304 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 ZNRF4Q8WWF5 429 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 HTRA1Q92743 480 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 EME1Q96AY2 570 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 LRR1Q96L50 414 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 ALKBH3Q96Q83 286 aaPredicted RBP13.75□□□□□ -0.21
VCX3B-204ENST00000453306 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
VCX3B-204ENST00000453306 C9orf16Q9BUW7 83 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 RBM4Q9BWF3 364 aaKnown RBP13.75□□□□□ -0.21
VCX3B-204ENST00000453306 GPR35Q9HC97 309 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 TBC1D23Q9NUY8 699 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 GALNT8Q9NY28 637 aa13.75□□□□□ -0.21
VCX3B-204ENST00000453306 GLTPQ9NZD2 209 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms