RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 LRMDAQ9H2I8 198 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 GSX1Q9H4S2 264 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF346Q9UL40 294 aaKnown RBP17.43■□□□□ 0.38
COL9A3-202ENST00000452372 POFUT2Q9Y2G5 429 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 RNF115Q9Y4L5 304 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 UNC119BA6NIH7 251 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 NDUFB2O95178 105 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 QDPRP09417 244 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF26P17031 533 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-202ENST00000452372 HOXB4P17483 251 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-202ENST00000452372 PTAFRP25105 342 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF83P51522 516 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 UBE2NP61088 152 aaKnown RBP17.42■□□□□ 0.38
COL9A3-202ENST00000452372 KRTAP21-3Q3LHN1 58 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 TMEM108Q6UXF1 575 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 IGFN1Q86VF2 1251 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 SPATA24Q86W54 205 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 CCDC36Q8IYA8 594 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 SYT14Q8NB59 555 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 NOXO1Q8NFA2 376 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 OR4C15Q8NGM1 316 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 RSRC1Q96IZ7 334 aaKnown RBP17.42■□□□□ 0.38
COL9A3-202ENST00000452372 C1QTNF6Q9BXI9 259 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 NDEL1Q9GZM8 345 aa17.42■□□□□ 0.38
COL9A3-202ENST00000452372 TCRBV3S1A0A5B6 114 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 DHHO43323 396 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 CD14P08571 375 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 FPR3P25089 353 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 RPL4P36578 427 aaKnown RBP17.41■□□□□ 0.38
COL9A3-202ENST00000452372 ACVR1BP36896 505 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF133P52736 654 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-202ENST00000452372 ERVK-25P63136 954 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 TOP3AQ13472 1001 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-202ENST00000452372 KEAP1Q14145 624 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 FAM205BPQ63HN1 556 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 WFDC11Q8NEX6 87 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF519Q8TB69 540 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 HDAC2Q92769 488 aaKnown RBP17.41■□□□□ 0.38
COL9A3-202ENST00000452372 MCHR2Q969V1 340 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 TSPAN32Q96QS1 320 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 KCNK17Q96T54 332 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 FOXB1Q99853 325 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 KATNB1Q9BVA0 655 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 REEP1Q9H902 201 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 PLCE1Q9P212 2302 aa17.41■□□□□ 0.38
COL9A3-202ENST00000452372 SEC14L2O76054 403 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 CD40P25942 277 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 GSSP48637 474 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 FXYD6P3P58550 94 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 CBX1P83916 185 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 GK3PQ14409 553 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 ADAM5Q6NVV9 412 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 PGBD2Q6P3X8 592 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF813Q6ZN06 617 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 CCDC121Q6ZUS5 278 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 ARIH2OSQ8N7S6 290 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 FAM169BQ8N8A8 192 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 LILRB1Q8NHL6 650 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-202ENST00000452372 GNPDA2Q8TDQ7 276 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 NMD3Q96D46 503 aaKnown RBP17.4■□□□□ 0.38
COL9A3-202ENST00000452372 RADILQ96JH8 1075 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 GPX7Q96SL4 187 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-202ENST00000452372 ALG12Q9BV10 488 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 MOV10Q9HCE1 1003 aaKnown RBP17.4■□□□□ 0.38
COL9A3-202ENST00000452372 VNN3Q9NY84 501 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 MGAT4BQ9UQ53 548 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 SAMHD1Q9Y3Z3 626 aaKnown RBP17.4■□□□□ 0.38
COL9A3-202ENST00000452372 RAI1Q7Z5J4 1906 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-202ENST00000452372 DSCAMO60469 2012 aa17.4■□□□□ 0.38
COL9A3-202ENST00000452372 NSD1Q96L73 2696 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-202ENST00000452372 A6NIZ1 184 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 M0R1B8 84 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 EBAG9O00559 213 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 ABCD4O14678 606 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 CST1P01037 141 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 NR2C1P13056 603 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 FOSL1P15407 271 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 RAP1BP61224 184 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 RAP1AP62834 184 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 TUBA1BP68363 451 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 TUBA4AP68366 448 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 MYBPC1Q00872 1141 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 PPP1R8Q12972 351 aaKnown RBP17.39■□□□□ 0.37
COL9A3-202ENST00000452372 TSPAN31Q12999 210 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 C10orf128Q5T292 105 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 ZNF770Q6IQ21 691 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-202ENST00000452372 SMARCD3Q6STE5 483 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 THSD4Q6ZMP0 1018 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 DPY19L2P2Q6ZN68 376 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 TUBA1AQ71U36 451 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 FAM122BQ7Z309 247 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 PAPD5Q8NDF8 572 aaKnown RBP17.39■□□□□ 0.37
COL9A3-202ENST00000452372 FNDC8Q8TC99 324 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 RBP7Q96R05 134 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 UBTD1Q9HAC8 227 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 SMURF2Q9HAU4 748 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 NRIP3Q9NQ35 241 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 CRNNQ9UBG3 495 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-202ENST00000452372 GRHPRQ9UBQ7 328 aa17.39■□□□□ 0.37
COL9A3-202ENST00000452372 ADAM18Q9Y3Q7 739 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms