RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 YIPF3Q9GZM5 350 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 SMURF2Q9HAU4 748 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 MRPL39Q9NYK5 338 aaKnown RBP15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 EMC3Q9P0I2 261 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 B3GALT5Q9Y2C3 310 aa15.01□□□□□ -0.01
PRPF40A-204ENST00000450303 ZNF469Q96JG9 3925 aaPredicted RBP15□□□□□ -0.01
PRPF40A-204ENST00000450303 FLNAP21333 2647 aaKnown RBP15□□□□□ -0.01
PRPF40A-204ENST00000450303 IGKV3D-15A0A087WSY6 115 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 ASAH2BP0C7U1 165 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 IGFBP5P24593 272 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 PRPS1P60891 318 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 PPP2R2BQ00005 443 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 KDM4DQ6B0I6 523 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 TMEM225Q6GV28 225 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 C20orf204Q6ZNR8 217 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 RASSF6Q6ZTQ3 369 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 ZNF786Q8N393 782 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 ADPRHL1Q8NDY3 354 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 AKAP1Q92667 903 aaKnown RBP eCLIP15□□□□□ -0.01
PRPF40A-204ENST00000450303 PERPQ96FX8 193 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 DLL4Q9NR61 685 aa15□□□□□ -0.01
PRPF40A-204ENST00000450303 LRRN3E7EW58 273 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 BLOC1S5-TXNDC5H3BN57 136 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 M0R082 166 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 CDC42EP2O14613 210 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 FZD7O75084 574 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 AKR7A3O95154 331 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 VAMP5O95183 116 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 ADORA3P0DMS8 318 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 OSMP13725 252 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 ATP6V1B1P15313 513 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 RPS6KA3P51812 740 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 ESRRGP62508 458 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 APOFQ13790 326 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 Q5PR19 223 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 NCMAPQ5T1S8 102 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 SHEQ5VZ18 495 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 MEX3DQ86XN8 651 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 PARP8Q8N3A8 854 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 LRRC17Q8N6Y2 441 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 CLDN22Q8N7P3 220 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 OR52L1Q8NGH7 329 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 OR13C2Q8NGS9 318 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 OR51A7Q8NH64 312 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 ZNF417Q8TAU3 575 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 NEUROG1Q92886 237 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 APH1AQ96BI3 265 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 ZNF587Q96SQ5 575 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 TMEM204Q9BSN7 226 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 RASD1Q9Y272 281 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 HIF3AQ9Y2N7 669 aa14.99□□□□□ -0.01
PRPF40A-204ENST00000450303 DPRXA6NFQ7 191 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 AQP7P3A6NL99 342 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 H3BN98 237 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 GPR171O14626 319 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 HS3ST1O14792 307 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 ARHGEF9O43307 516 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 PTP4A3O75365 173 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 MRPL33O75394 65 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 RAD51DO75771 328 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 NDUFB2O95178 105 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 ALPLP05186 524 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 CD3EP07766 207 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 AHCYP23526 432 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 FOXG1P55316 489 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 ADARB1P78563 741 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 H3F3AP84243 136 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 ZP4Q12836 540 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 FBXW9Q5XUX1 488 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 SMARCD3Q6STE5 483 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 KLHL17Q6TDP4 642 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 ZNF433Q8N7K0 673 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 TMEM99Q8N816 258 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 LILRB1Q8NHL6 650 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 TEX47Q8TBZ9 253 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 FANK1Q8TC84 345 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 TNFRSF13CQ96RJ3 184 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 GPA33Q99795 319 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 SMR3AQ99954 134 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 TEX12Q9BXU0 123 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 SIGLEC7Q9Y286 467 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 RNF115Q9Y4L5 304 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 CDH10Q9Y6N8 788 aa14.98□□□□□ -0.01
PRPF40A-204ENST00000450303 CADP27708 2225 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 TRAV27A0A087WT01 109 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 CIB4A0PJX0 185 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 DLGAP1O14490 977 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 PLPP3O14495 311 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 RNF13O43567 381 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 SLC6A6P31641 620 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 RPL4P36578 427 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 SLC16A1P53985 500 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 PUDPQ08623 228 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 FAPQ12884 760 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 TOP3AQ13472 1001 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 IL18R1Q13478 541 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 PPA1Q15181 289 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 ALG10Q5BKT4 473 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 C9orf135Q5VTT2 229 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 SEZ6L2Q6UXD5 910 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms