RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 F2RL1P55085 397 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 REEP5Q00765 189 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 RBPJQ06330 500 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 PLGLAQ15195 96 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 DEFB133Q30KQ1 61 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 COX20Q5RI15 118 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 COL13A1Q5TAT6 717 aaPredicted RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 WDR5BQ86VZ2 330 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 QSER1Q2KHR3 1735 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 TMEM72A0PK05 275 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 IGHEP01854 428 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 F11P03951 625 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 TK1P04183 234 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 TIMP2P16035 220 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 ATP1B3P54709 279 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 IAH1Q2TAA2 248 aaPredicted RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 BRICD5Q6PL45 260 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 TMEM64Q6YI46 380 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 UBE2FQ969M7 185 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 USB1Q9BQ65 265 aaKnown RBP12.84□□□□□ -0.35
ITGB4-202ENST00000449880 UBQLN3Q9H347 655 aa12.84□□□□□ -0.35
ITGB4-202ENST00000449880 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 FXYD1O00168 92 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 LGALS8O00214 317 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 PRICKLE3O43900 615 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 ABLIM3O94929 683 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CHRNB4P30926 498 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 ZNF133P52736 654 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 DCAF7P61962 342 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 IHHQ14623 411 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 LPAL2Q16609 132 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 LOC102725191A0A1B0GVB3 256 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 UMAD1C9J7I0 102 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 SULT2B1O00204 365 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 KLKB1P03952 638 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 COX15Q7KZN9 410 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 PRSS35Q8N3Z0 413 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CMSS1Q9BQ75 279 aaKnown RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 NARFLQ9H6Q4 476 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 MED20Q9H944 212 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 SLC16A7O60669 478 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 RAD52P43351 418 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CLDN12P56749 244 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CORO6Q6QEF8 472 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 PRICKLE2Q7Z3G6 844 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 OR1S2Q8NGQ3 325 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 ANKRD9Q96BM1 317 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 TOE1Q96GM8 510 aaKnown RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 ADAM19Q9H013 955 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 ZNF768Q9H5H4 540 aaKnown RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 SLC23A1Q9UHI7 598 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 LRRC37AA6NMS7 1700 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 MEIKINA0A087WXM9 373 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 A0A0U1RQK1 487 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CD79AP11912 226 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 PRPH2P23942 346 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 ARNTP27540 789 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 ZNF239Q16600 458 aaKnown RBP12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CCNJQ5T5M9 372 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 RSPRY1Q96DX4 576 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CHRDQ9H2X0 955 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 CBLCQ9ULV8 474 aa12.83□□□□□ -0.36
ITGB4-202ENST00000449880 SCO1O75880 301 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 FABP1P07148 127 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 GABRR1P24046 479 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 EXOSC6Q5RKV6 272 aaKnown RBP12.82□□□□□ -0.36
ITGB4-202ENST00000449880 FAM180BQ6P0A1 224 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 MCATQ8IVS2 390 aaKnown RBP12.82□□□□□ -0.36
ITGB4-202ENST00000449880 LGI3Q8N145 548 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 SMIM4Q8WVI0 70 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 TIMM29Q9BSF4 260 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 PLEKHA2Q9HB19 425 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 PPT2Q9UMR5 302 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 TP53TG5Q9Y2B4 290 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 GPR55Q9Y2T6 319 aaPredicted RBP12.82□□□□□ -0.36
ITGB4-202ENST00000449880 CSAG2Q9Y5P2 127 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 ANKRD30BLA7E2S9 258 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 ZNF728P0DKX0 622 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 PSMB6P28072 239 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 PSMB3P49720 205 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 HOXC5Q00444 222 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 CRMP1Q14194 572 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 BAP18Q8IXM2 172 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 MITD1Q8WV92 249 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 MSI2Q96DH6 328 aaKnown RBP12.82□□□□□ -0.36
ITGB4-202ENST00000449880 GNPNAT1Q96EK6 184 aaPredicted RBP12.82□□□□□ -0.36
ITGB4-202ENST00000449880 PDXPQ96GD0 296 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 HHIPQ96QV1 700 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 PAPOLGQ9BWT3 736 aaKnown RBP12.82□□□□□ -0.36
ITGB4-202ENST00000449880 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
ITGB4-202ENST00000449880 TOLLIPQ9H0E2 274 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms