RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SH3GL3Q99963 347 aa15.29■□□□□ 0.04
DDX56-207ENST00000448192 DENND2DQ9H6A0 471 aaPredicted RBP15.29■□□□□ 0.04
DDX56-207ENST00000448192 INIPQ9NRY2 104 aa15.29■□□□□ 0.04
DDX56-207ENST00000448192 TMEM38BQ9NVV0 291 aa15.29■□□□□ 0.04
DDX56-207ENST00000448192 LOC390937A0A1W2PQ73 354 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 TMEM129A0AVI4 362 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 NDUFS8O00217 210 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 GSTA4O15217 222 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 PIP5K1CO60331 668 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 ENTPD5O75356 428 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 FARS2O95363 451 aaKnown RBP15.28■□□□□ 0.04
DDX56-207ENST00000448192 ERCC1P07992 297 aaPredicted RBP15.28■□□□□ 0.04
DDX56-207ENST00000448192 ZNF35P13682 527 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 IFNA8P32881 189 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 YAP1P46937 504 aaKnown RBP15.28■□□□□ 0.04
DDX56-207ENST00000448192 DAP3P51398 398 aaKnown RBP15.28■□□□□ 0.04
DDX56-207ENST00000448192 LSM11P83369 360 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■■■■□ 19.9
DDX56-207ENST00000448192 VLDLRP98155 873 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 GALK2Q01415 458 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 RUNX1T1Q06455 604 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 ST3GAL3Q11203 375 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 C6orf52Q5T4I8 152 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 GKAP1Q5VSY0 366 aaPredicted RBP15.28■□□□□ 0.04
DDX56-207ENST00000448192 VTCN1Q7Z7D3 282 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 CDK20Q8IZL9 346 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 ASB10Q8WXI3 467 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 MCHR2Q969V1 340 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 FOXN4Q96NZ1 517 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 RNF121Q9H920 327 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 EFCAB1Q9HAE3 211 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 MYOZ1Q9NP98 299 aaPredicted RBP15.28■□□□□ 0.04
DDX56-207ENST00000448192 FBXL3Q9UKT7 428 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 A4GNTQ9UNA3 340 aa15.28■□□□□ 0.04
DDX56-207ENST00000448192 VWC2LB2RUY7 222 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 CXCR6O00574 342 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 ZNF682O95780 498 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 IGF2P01344 180 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 SERPINA5P05154 406 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 ADRA2AP08913 450 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 IFI30P13284 250 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 ACADSP16219 412 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 LSP1P33241 339 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 NR4A2P43354 598 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 ZNF84P51523 738 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 SLC7A2P52569 658 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 LAPTM4AQ15012 233 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 CYB5R2Q6BCY4 276 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 HDDC2Q7Z4H3 204 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 NOXO1Q8NFA2 376 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 OR4K5Q8NGD3 323 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 PRRC1Q96M27 445 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 HOPXQ9BPY8 73 aaPredicted RBP15.27■□□□□ 0.04
DDX56-207ENST00000448192 RHCGQ9UBD6 479 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 SNX13Q9Y5W8 968 aa15.27■□□□□ 0.04
DDX56-207ENST00000448192 NME4O00746 187 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 TRMUO75648 421 aaKnown RBP15.26■□□□□ 0.03
DDX56-207ENST00000448192 IFNW1P05000 195 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 DAOP14920 347 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 GLRXP35754 106 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 NUDT2P50583 147 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 HIST3H3Q16695 136 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 IQCCQ4KMZ1 466 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 TMEM53Q6P2H8 277 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 SLC16A14Q7RTX9 510 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 TREML1Q86YW5 311 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 HIPK1Q86Z02 1210 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 ZNF584Q8IVC4 421 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 NEU4Q8WWR8 484 aaPredicted RBP15.26■□□□□ 0.03
DDX56-207ENST00000448192 LIPHQ8WWY8 451 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 BPIFA2Q96DR5 249 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 KCNK17Q96T54 332 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 SYT3Q9BQG1 590 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 FNDC11Q9BVV2 318 aa15.26■□□□□ 0.03
DDX56-207ENST00000448192 MRPL13Q9BYD1 178 aaKnown RBP15.26■□□□□ 0.03
DDX56-207ENST00000448192 MRPL37Q9BZE1 423 aaKnown RBP15.26■□□□□ 0.03
DDX56-207ENST00000448192 J3KTA2 159 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 IGHV4-31P0DP07 118 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 ZNF16P17020 682 aaPredicted RBP15.25■□□□□ 0.03
DDX56-207ENST00000448192 FUT4P22083 530 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 GSK3BP49841 420 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 TOP3AQ13472 1001 aaPredicted RBP15.25■□□□□ 0.03
DDX56-207ENST00000448192 MSMPQ1L6U9 139 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 SLC36A2Q495M3 483 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 ALG10Q5BKT4 473 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 FKBP9P1Q75LS8 142 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 MEX3DQ86XN8 651 aaKnown RBP15.25■□□□□ 0.03
DDX56-207ENST00000448192 LRRC18Q8N456 261 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 SLC30A7Q8NEW0 376 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 MRPL24Q96A35 216 aaKnown RBP15.25■□□□□ 0.03
DDX56-207ENST00000448192 ELAC2Q9BQ52 826 aaKnown RBP15.25■□□□□ 0.03
DDX56-207ENST00000448192 TPK1Q9H3S4 243 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 STX18Q9P2W9 335 aaKnown RBP15.25■□□□□ 0.03
DDX56-207ENST00000448192 FZR1Q9UM11 496 aa15.25■□□□□ 0.03
DDX56-207ENST00000448192 CUBNO60494 3623 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 IGHV4-61A0A0C4DH41 118 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 CENPBD1B2RD01 187 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 SYNGR3O43761 229 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 SLC2A10O95528 541 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 SERPINA1P01009 418 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 IGFBP1P08833 259 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms