RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SLC22A11Q9NSA0 550 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CCDC88AQ3V6T2 1871 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM221A6NGB7 291 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 RFX2P48378 723 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 BIDP55957 195 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 HSD17B7P56937 341 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CSNK1G2P78368 415 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 SLC35A1P78382 337 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 BAXQ07812 192 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 GLYR1Q49A26 553 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 FOXB2Q5VYV0 432 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM64Q6YI46 380 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 WDR88Q6ZMY6 472 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TMPRSS7Q7RTY8 843 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 BAGE2Q86Y30 109 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 C19orf47Q8N9M1 422 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CLEC1AQ8NC01 280 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 OR52I2Q8NH67 350 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 UBL7Q96S82 380 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 DCLRE1CQ96SD1 692 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CROCCQ5TZA2 2017 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CACNA1CQ13936 2221 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 NSG1A0A0A6YYJ2 146 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 MAGEB4O15481 346 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PRKRAO75569 313 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 UTS2O95399 124 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 HPNP05981 417 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ADRB1P08588 477 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 APEHP13798 732 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 CPEP16870 476 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 NFYBP25208 207 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 YPEL5P62699 121 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 MAT1AQ00266 395 aaKnown RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 C17orf67Q0P5P2 114 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 PMPCAQ10713 525 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ADIRFQ15847 76 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF705AQ6ZN79 300 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 MED25Q71SY5 747 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 SKA3Q8IX90 412 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 OR51A4Q8NGJ6 313 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 SLCO4A1Q96BD0 722 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 RASD2Q96D21 266 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TAF9BQ9HBM6 251 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TAS2R5Q9NYW4 299 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 LRIT1Q9P2V4 623 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 GNG12Q9UBI6 72 aa7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM184BQ9Y519 407 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-204ENST00000448183 TRPM3Q9HCF6 1732 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 SLC5A10A0PJK1 596 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ZAR1LA6NP61 321 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 SELENOFO60613 162 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 KLKB1P03952 638 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 GZMKP49863 264 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 GABREP78334 506 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 SNTB1Q13884 538 aaKnown RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 HABP2Q14520 560 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 TESK1Q15569 626 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 SAXO2Q658L1 398 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 GLIPR1L1Q6UWM5 242 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF836Q6ZNA1 936 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 HIST2H3AQ71DI3 136 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 OLIG3Q7RTU3 272 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 PPP1R3BQ86XI6 285 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ANGPTL5Q86XS5 388 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 RBM45Q8IUH3 476 aaKnown RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 NKAIN4Q8IVV8 208 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM217Q8N7C4 229 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 OR4N2Q8NGD1 307 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 OLIG1Q8TAK6 271 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ARRDC3Q96B67 414 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 SEH1LQ96EE3 360 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF75AQ96N20 296 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 CCNL2Q96S94 520 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 P2RY12Q9H244 342 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 POFUT1Q9H488 388 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 FKRPQ9H9S5 495 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 BOKQ9UMX3 212 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 A0A1B0GTW7 788 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 FITM1A5D6W6 292 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 A8MVM7 634 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 STMND1H3BQB6 276 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 PLPP1O14494 284 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 TIMP1P01033 207 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 PSMB3P49720 205 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF133P52736 654 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 AKR1C1Q04828 323 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM31Q5JXX7 168 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 LIPNQ5VXI9 398 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ADAMTSL4Q6UY14 1074 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 C15orf54Q8N8G6 183 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 MRPL43Q8N983 215 aaKnown RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 HSD17B8Q92506 261 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 C10orf90Q96M02 699 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 TXN2Q99757 166 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 MAP3K3Q99759 626 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 LMAN1LQ9HAT1 526 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ISYNA1Q9NPH2 558 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 KCNIP2Q9NS61 270 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 FBXL4Q9UKA2 621 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms