RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 FAM215AQ9Y5M1 114 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 KALRNO60229 2985 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 MBD3L4A6NDZ8 208 aaPredicted RBP17.31■□□□□ 0.36
SGCE-207ENST00000447873 MBD3L3A6NE82 208 aaPredicted RBP17.31■□□□□ 0.36
SGCE-207ENST00000447873 MBD3L5A6NJ08 208 aaPredicted RBP17.31■□□□□ 0.36
SGCE-207ENST00000447873 DCTN6O00399 190 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 XPNPEP2O43895 674 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 SLC16A7O60669 478 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 CCDC159P0C7I6 412 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 CRABP1P29762 137 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 AGTR1P30556 359 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 PER3P56645 1201 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 DNM1P34Q6PK57 102 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 C3P1Q6ZMU1 363 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 MEPCEQ7L2J0 689 aaKnown RBP17.31■□□□□ 0.36
SGCE-207ENST00000447873 GCNT2Q8N0V5 402 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 PROKR2Q8NFJ6 384 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 OR51L1Q8NGJ5 315 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 MBD3L2Q8NHZ7 208 aaPredicted RBP17.31■□□□□ 0.36
SGCE-207ENST00000447873 INTS12Q96CB8 462 aaKnown RBP17.31■□□□□ 0.36
SGCE-207ENST00000447873 YTHDF1Q9BYJ9 559 aaKnown RBP17.31■□□□□ 0.36
SGCE-207ENST00000447873 BLOC1S6Q9UL45 172 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 FKBP7Q9Y680 259 aa17.31■□□□□ 0.36
SGCE-207ENST00000447873 SLC22A31A6NKX4 558 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 SS18L1O75177 396 aaPredicted RBP17.3■□□□□ 0.36
SGCE-207ENST00000447873 CTLA4P16410 223 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 SLC2A5P22732 501 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 HTR1FP30939 366 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 FMODQ06828 376 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 HIST3H3Q16695 136 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 C20orf196Q8IYI0 205 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 OR6K6Q8NGW6 343 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 TEAD3Q99594 435 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 PLCXD1Q9NUJ7 323 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 GLTPQ9NZD2 209 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 WARS2Q9UGM6 360 aaKnown RBP17.3■□□□□ 0.36
SGCE-207ENST00000447873 TINAGQ9UJW2 476 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 B9D1Q9UPM9 204 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 EMC9Q9Y3B6 208 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 TPRKBQ9Y3C4 175 aa17.3■□□□□ 0.36
SGCE-207ENST00000447873 FAM171A2A8MVW0 826 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 TNFAIP8O95379 198 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 QDPRP09417 244 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 DBTP11182 482 aaKnown RBP17.29■□□□□ 0.36
SGCE-207ENST00000447873 CRHBPP24387 322 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 PYCR1P32322 319 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 ZNF91Q05481 1191 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 SLC35D3Q5M8T2 416 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 SEM1Q6ZVN7 128 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 FAM214BQ7L5A3 538 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.29■□□□□ 0.36
SGCE-207ENST00000447873 ZBTB46Q86UZ6 589 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 ZNF540Q8NDQ6 660 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 TMEM54Q969K7 222 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 MCHR2Q969V1 340 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 APH1AQ96BI3 265 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 MOKQ9UQ07 419 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 COL6A6A6NMZ7 2263 aa17.29■□□□□ 0.36
SGCE-207ENST00000447873 PTGES3LE9PB15 166 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 GLCEO94923 617 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 IL2RAP01589 272 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 RPSAP08865 295 aaKnown RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 TIMP3P35625 211 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 MTNR1AP48039 350 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 CENPAP49450 140 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 CASP6P55212 293 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 LCN1P1Q5VSP4 162 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 B3GLCTQ6Y288 498 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 NUFIP2Q7Z417 695 aaKnown RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 ZNF100Q8IYN0 542 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 GPR137CQ8N3F9 429 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 RPRMLQ8N4K4 120 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 CNEP1R1Q8N9A8 125 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 ZNRF4Q8WWF5 429 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 NSMAFQ92636 917 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 NMD3Q96D46 503 aaKnown RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 C12orf49Q9H741 205 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 SH3BGRL2Q9UJC5 107 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 FOXD3Q9UJU5 478 aaPredicted RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 CCDC182A6NF36 153 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 OR6C65A6NJZ3 312 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 KHDRBS3O75525 346 aaKnown RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 UPK3AO75631 287 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 KRT33AO76009 404 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 EEF1B2P24534 225 aaKnown RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 GSTT1P30711 240 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 ATP6V1E1P36543 226 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 SIRPAP78324 504 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 TMED1Q13445 227 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 ETFDHQ16134 617 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 PHYHD1Q5SRE7 291 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 LRFN4Q6PJG9 635 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 AHSA2Q719I0 299 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 ZMYND19Q96E35 227 aaPredicted RBP17.28■□□□□ 0.36
SGCE-207ENST00000447873 RNFT2Q96EX2 444 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 ZFP3Q96NJ6 502 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 TTYH2Q9BSA4 534 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 ULBP2Q9BZM5 246 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 RACGAP1Q9H0H5 632 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms