RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 GOSR2O14653 212 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 ST6GAL1P15907 406 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 RPA2P15927 270 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 EFNB2P52799 333 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 SKP1P63208 163 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 RPL18Q07020 188 aaKnown RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 SKP2Q13309 424 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 KIR2DS5Q14953 304 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 UBXN2BQ14CS0 331 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 DEFB110Q30KQ9 67 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 NKAIN2Q5VXU1 208 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 DPY19L4Q7Z388 723 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 HSD17B13Q7Z5P4 300 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 OR51D1Q8NGF3 324 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 TSPAN32Q96QS1 320 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 APMAPQ9HDC9 416 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 DZANK1Q9NVP4 752 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 FXYD6-FXYD2A0A087WZ82 144 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 CLDN4O14493 209 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 KLF8O95600 359 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 GTF2F2P13984 249 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 ATF4P18848 351 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 KIR3DL2P43630 455 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 TOMM20Q15388 145 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 CD226Q15762 336 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 TSSK4Q6SA08 328 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 ZSCAN1Q8NBB4 408 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 CLEC1AQ8NC01 280 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 OR51S1Q8NGJ8 323 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 OR5M9Q8NGP3 310 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 ADAMTS18Q8TE60 1221 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 SLC37A2Q8TED4 501 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 INTS14Q96SY0 518 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 RPP25Q9BUL9 199 aaKnown RBP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 FXYD6Q9H0Q3 95 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 C1orf198Q9H425 327 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 CDV3Q9UKY7 258 aaKnown RBP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 OR5K4A6NMS3 321 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 CDC40O60508 579 aaKnown RBP eCLIP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 SRPX2O60687 465 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 CDC123O75794 336 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 RENP00797 406 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 PRSS3P35030 304 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 POU3F4P49335 361 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 OC90Q02509 493 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-204ENST00000447182 GRM7Q14831 915 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 DCAF12L2Q5VW00 463 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 SFTPA2Q8IWL1 248 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 BVESQ8NE79 360 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 OR6K3Q8NGY3 331 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 TNFAIP8L1Q8WVP5 186 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 UBQLN4Q9NRR5 601 aa17.29■□□□□ 0.36
SDCBP-204ENST00000447182 TMEM272A0A1B0GTI8 110 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 H7C1C5 153 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 SLC17A2O00624 439 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 TSPAN4O14817 238 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 OIP5O43482 229 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 ITGA5P08648 1049 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 MST1P26927 711 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 LCN6P62502 163 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 BTG2P78543 158 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 CCINQ13939 588 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 TFAP2EQ6VUC0 442 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 BIVMQ86UB2 503 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 CDH26Q8IXH8 852 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 GATSQ8NAP1 163 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 OR8K3Q8NH51 312 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 OTOSQ8NHW6 89 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 ST8SIA4Q92187 359 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 PRODH2Q9UF12 536 aa17.28■□□□□ 0.36
SDCBP-204ENST00000447182 TRAV18A0A075B6X5 111 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 LOC100289279A0A1B0GTE1 492 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 SLC22A23A1A5C7 686 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 TNFP01375 233 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 CLPSP04118 112 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 ITGB2P05107 769 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 AKT2P31751 481 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 GUCA2AQ02747 115 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 BTN1A1Q13410 526 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 WDR38Q5JTN6 314 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 ZNF660Q6AZW8 331 aaPredicted RBP17.27■□□□□ 0.36
SDCBP-204ENST00000447182 FAM166AQ6J272 317 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 Q6ZSR6 202 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 MCATQ8IVS2 390 aaKnown RBP17.27■□□□□ 0.36
SDCBP-204ENST00000447182 PDZD9Q8IXQ8 264 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 C19orf47Q8N9M1 422 aaKnown RBP17.27■□□□□ 0.36
SDCBP-204ENST00000447182 ZBTB44Q8NCP5 570 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 OR1S1Q8NH92 325 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 GPX8Q8TED1 209 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 FAM3DQ96BQ1 224 aa17.27■□□□□ 0.36
SDCBP-204ENST00000447182 POM121CA8CG34 1229 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 WNT11O96014 354 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 MPGP29372 298 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 RAB11BQ15907 218 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 C2orf76Q3KRA6 126 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 YOD1Q5VVQ6 348 aaPredicted RBP17.27■□□□□ 0.35
SDCBP-204ENST00000447182 STEAP1BQ6NZ63 245 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 CBLN3Q6UW01 205 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 ARSKQ6UWY0 536 aa17.27■□□□□ 0.35
SDCBP-204ENST00000447182 TMEM184AQ6ZMB5 413 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms