RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 KCNS3Q9BQ31 491 aa9.39□□□□□ -0.91
SF3A1-203ENST00000444440 SPAG4Q9NPE6 437 aa9.39□□□□□ -0.91
SF3A1-203ENST00000444440 NDE1Q9NXR1 346 aa9.39□□□□□ -0.91
SF3A1-203ENST00000444440 ADA2Q9NZK5 511 aa9.39□□□□□ -0.91
SF3A1-203ENST00000444440 RHCGQ9UBD6 479 aa9.39□□□□□ -0.91
SF3A1-203ENST00000444440 TAGLN3Q9UI15 199 aa9.39□□□□□ -0.91
SF3A1-203ENST00000444440 POFUT2Q9Y2G5 429 aa9.39□□□□□ -0.91
SF3A1-203ENST00000444440 hCG_2039718K7EN88 272 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 CXCR6O00574 342 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 TRMUO75648 421 aaKnown RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 PDE5AO76074 875 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 PRSS23O95084 383 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 FAM107AO95990 144 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 F12P00748 615 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 QDPRP09417 244 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 THRBP10828 461 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 MAKP20794 623 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 RBM34P42696 430 aaKnown RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 GIPRP48546 466 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 GSK3BP49841 420 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 SNRPD2P62316 118 aaKnown RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 MXRA7P84157 204 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 CHRNB3Q05901 458 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 SNTB2Q13425 540 aaKnown RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 RAB39AQ14964 217 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 LAPTM4AQ15012 233 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 HIST3H3Q16695 136 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 TMEM249Q2WGJ8 235 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 FKBP9P1Q75LS8 142 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 LRP11Q86VZ4 500 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 PAQR4Q8N4S7 273 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 CLDN22Q8N7P3 220 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 SYT14Q8NB59 555 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 NOXO1Q8NFA2 376 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 OR4F15Q8NGB8 312 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 ZNF566Q969W8 418 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 FAM162AQ96A26 154 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 NMD3Q96D46 503 aaKnown RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 SGTBQ96EQ0 304 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 SLC25A44Q96H78 314 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 TNFRSF13CQ96RJ3 184 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 SEPHS2Q99611 448 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 DOK1Q99704 481 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 VRK1Q99986 396 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 MRPL13Q9BYD1 178 aaKnown RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 ZNF442Q9H7R0 627 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 B3GAT2Q9NPZ5 323 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 TMEM38BQ9NVV0 291 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 MYEF2Q9P2K5 600 aaKnown RBP9.38□□□□□ -0.91
SF3A1-203ENST00000444440 RPS6KA6Q9UK32 745 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 PMF1-BGLAPU3KQ54 211 aa9.38□□□□□ -0.91
SF3A1-203ENST00000444440 SH3PXD2BA1X283 911 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 HTR3EA5X5Y0 456 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 B9A039 149 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 DHHO43323 396 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 CRLF1O75462 422 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 SLC2A10O95528 541 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 ZNF682O95780 498 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 BCL10O95999 233 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 CCL2P13500 99 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 NCK1P16333 377 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 NR4A1P22736 598 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 PAX7P23759 505 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 ZNF133P52736 654 aaPredicted RBP9.37□□□□□ -0.91
SF3A1-203ENST00000444440 RAB1AP62820 205 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 PPP2R2BQ00005 443 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 FMODQ06828 376 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 LOXL1Q08397 574 aaPredicted RBP9.37□□□□□ -0.91
SF3A1-203ENST00000444440 ST3GAL3Q11203 375 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 DAG1Q14118 895 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 ARMC4Q5T2S8 1044 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 C6orf52Q5T4I8 152 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 C16orf89Q6UX73 402 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 CBLL1Q75N03 491 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 IGFN1Q86VF2 1251 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 CCDC36Q8IYA8 594 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 SLC22A24Q8N4F4 322 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 LRRC75AQ8NAA5 344 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 CCDC197Q8NCU1 140 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 LIPHQ8WWY8 451 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 HDAC2Q92769 488 aaKnown RBP9.37□□□□□ -0.91
SF3A1-203ENST00000444440 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 PRRC1Q96M27 445 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 MDFIQ99750 246 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 SOX7Q9BT81 388 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 MRPL37Q9BZE1 423 aaKnown RBP9.37□□□□□ -0.91
SF3A1-203ENST00000444440 YAE1D1Q9NRH1 226 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 ABCD2Q9UBJ2 740 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 FZR1Q9UM11 496 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 UGT2A1Q9Y4X1 527 aa9.37□□□□□ -0.91
SF3A1-203ENST00000444440 TRAV27A0A087WT01 109 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 LYNX1G3V0Z9 82 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 SERPINA1P01009 418 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 IGF2P01344 180 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 IFNW1P05000 195 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 IGHV4-31P0DP07 118 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 LYNX1P0DP58 116 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 IFI30P13284 250 aa9.36□□□□□ -0.91
SF3A1-203ENST00000444440 ACADSP16219 412 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms