RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 NR2C1P13056 603 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 ZNF35P13682 527 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 ALDH3B1P43353 468 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 GPR6P46095 362 aaPredicted RBP10.14□□□□□ -0.79
TTC28-203ENST00000442232 DAP3P51398 398 aaKnown RBP10.14□□□□□ -0.79
TTC28-203ENST00000442232 TAS2R41P59536 307 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 CCNIQ14094 377 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 TBC1D28Q2M2D7 210 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 VMACQ2NL98 169 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 RGS7BPQ6MZT1 257 aaPredicted RBP10.14□□□□□ -0.79
TTC28-203ENST00000442232 DEF8Q6ZN54 512 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 SLC16A14Q7RTX9 510 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 RETREG3Q86VR2 466 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 RBM45Q8IUH3 476 aaKnown RBP10.14□□□□□ -0.79
TTC28-203ENST00000442232 SLC30A7Q8NEW0 376 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 OR1J2Q8NGS2 313 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 RDH5Q92781 318 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 TAMM41Q96BW9 452 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 ECSITQ9BQ95 431 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 POLR2J2Q9GZM3 115 aaKnown RBP10.14□□□□□ -0.79
TTC28-203ENST00000442232 POLR2J3Q9H1A7 115 aaKnown RBP10.14□□□□□ -0.79
TTC28-203ENST00000442232 TMEM38BQ9NVV0 291 aa10.14□□□□□ -0.79
TTC28-203ENST00000442232 EDF1O60869 148 aaKnown RBP10.13□□□□□ -0.79
TTC28-203ENST00000442232 MT-ND5P03915 603 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 QDPRP09417 244 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 TROVE2P10155 538 aaKnown RBP eCLIP10.13□□□□□ -0.79
TTC28-203ENST00000442232 SAGP10523 405 aaPredicted RBP10.13□□□□□ -0.79
TTC28-203ENST00000442232 TCN1P20061 433 aaPredicted RBP10.13□□□□□ -0.79
TTC28-203ENST00000442232 ACHEP22303 614 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 IFNA8P32881 189 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 APLNRP35414 380 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 CDH15P55291 814 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 KLF3P57682 345 aaPredicted RBP10.13□□□□□ -0.79
TTC28-203ENST00000442232 HSF2Q03933 536 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 SCGB2A2Q13296 93 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 RIN1Q13671 783 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 MAD2L1BPQ15013 274 aaPredicted RBP10.13□□□□□ -0.79
TTC28-203ENST00000442232 MAPRE2Q15555 327 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 FXNQ16595 210 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 METTL21CQ5VZV1 264 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 TMEM154Q6P9G4 183 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 WDR88Q6ZMY6 472 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 GLCCI1Q86VQ1 547 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 CARM1Q86X55 608 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 SKA3Q8IX90 412 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 ICA1LQ8NDH6 482 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 NOXO1Q8NFA2 376 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 OR4K5Q8NGD3 323 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 SH3GL3Q99963 347 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 C19orf24Q9BVV8 132 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 ZNF416Q9BWM5 594 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 PCDHAC1Q9H158 963 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 ZNF385DQ9H6B1 395 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 VIPAS39Q9H9C1 493 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 TAS2R5Q9NYW4 299 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 ZNF224Q9NZL3 707 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 TMEFF2Q9UIK5 374 aaPredicted RBP10.13□□□□□ -0.79
TTC28-203ENST00000442232 FZR1Q9UM11 496 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 SH3GLB1Q9Y371 365 aa10.13□□□□□ -0.79
TTC28-203ENST00000442232 GMNCA6NCL1 334 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 BBIP1A8MTZ0 92 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 CENPBD1B2RD01 187 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 B4DSR2 109 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 LYNX1G3V0Z9 82 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 HAX1O00165 279 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 TCF21O43680 179 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 LILRA1O75019 489 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 OR7A10O76100 309 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 TFP02787 698 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 MT-ND1P03886 318 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 LCKP06239 509 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 ASAH2BP0C7U1 165 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 PATE4P0C8F1 98 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 FAM157BP0CG42 384 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 PGA4P0DJD7 388 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 PGA3P0DJD8 388 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 LYNX1P0DP58 116 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 DRD4P21917 467 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 IL2RGP31785 369 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 RBM34P42696 430 aaKnown RBP10.12□□□□□ -0.79
TTC28-203ENST00000442232 TRIP10Q15642 601 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 MOGQ16653 247 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 KRTAP24-1Q3LI83 254 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 NRN1LQ496H8 165 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 NANOGP8Q6NSW7 305 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 ERICH5Q6P6B1 374 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 UNQ6126/PRO20091Q6UXV3 157 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 NHLRC1Q6VVB1 395 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 RINLQ6ZS11 566 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 CCDC80Q76M96 950 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 WDFY1Q8IWB7 410 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 RFLNBQ8N5W9 214 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 LRRC17Q8N6Y2 441 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 RBM15BQ8NDT2 890 aaKnown RBP10.12□□□□□ -0.79
TTC28-203ENST00000442232 OR8J3Q8NGG0 315 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 OR4D11Q8NGI4 311 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 SYNPRQ8TBG9 265 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 C11orf40Q8WZ69 217 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 SGTBQ96EQ0 304 aa10.12□□□□□ -0.79
TTC28-203ENST00000442232 ZNF75AQ96N20 296 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms