RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 DHHO43323 396 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 PTP4A3O75365 173 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 NDUFB2O95178 105 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 ATE1O95260 518 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 SLC2A10O95528 541 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 FPR3P25089 353 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 CD40P25942 277 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 CAPZA2P47755 286 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 IST1P53990 364 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 CD47Q08722 323 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 HIST3H3Q16695 136 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 OR2T5Q6IEZ7 315 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 PGBD2Q6P3X8 592 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
CPSF4-205ENST00000440514 OR2T29Q8NH02 315 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 AKAP1Q92667 903 aaKnown RBP eCLIP15.74■□□□□ 0.11
CPSF4-205ENST00000440514 MCHR2Q969V1 340 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 KCNK17Q96T54 332 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 SEC61A2Q9H9S3 476 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 U3KQV3 271 aa15.74■□□□□ 0.11
CPSF4-205ENST00000440514 IGKV1D-43A0A0B4J1Z2 117 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 IGHV1-18A0A0C4DH31 117 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 CENPBD1B2RD01 187 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 SHISA9B4DS77 424 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 H7C1C5 153 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 HS3ST1O14792 307 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 HLA-HP01893 362 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 CD14P08571 375 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 NR2C1P13056 603 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 DNASE1P24855 282 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 PTAFRP25105 342 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 CDH11P55287 796 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 LCN6P62502 163 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 CBX1P83916 185 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 KEAP1Q14145 624 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 MESTQ5EB52 335 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 ZNF627Q7L945 461 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 MYPOPQ86VE0 399 aaPredicted RBP15.73■□□□□ 0.11
CPSF4-205ENST00000440514 C10orf67Q8IYJ2 551 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 NINJ1Q92982 152 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 NMD3Q96D46 503 aaKnown RBP15.73■□□□□ 0.11
CPSF4-205ENST00000440514 Q96M85 177 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 ZNF570Q96NI8 536 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 CHID1Q9BWS9 393 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 REEP1Q9H902 201 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 NOX3Q9HBY0 568 aa15.73■□□□□ 0.11
CPSF4-205ENST00000440514 MOV10Q9HCE1 1003 aaKnown RBP15.73■□□□□ 0.11
CPSF4-205ENST00000440514 SAMHD1Q9Y3Z3 626 aaKnown RBP15.73■□□□□ 0.11
CPSF4-205ENST00000440514 TEX13CA0A0J9YWL9 993 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 TCRBV3S1A0A5B6 114 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 ENTPD5O75356 428 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 CCNB2O95067 398 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 CELA3BP08861 270 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 CD53P19397 219 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 GSSP48637 474 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 HMGA2P52926 109 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 ZNF672Q499Z4 452 aaPredicted RBP15.72■□□□□ 0.11
CPSF4-205ENST00000440514 FAM205BPQ63HN1 556 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 C1orf94Q6P1W5 598 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 SMARCD3Q6STE5 483 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 FAM122BQ7Z309 247 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 MDP1Q86V88 176 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 ARIH2OSQ8N7S6 290 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 RASD2Q96D21 266 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 SLC38A2Q96QD8 506 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 GPX7Q96SL4 187 aaPredicted RBP15.72■□□□□ 0.11
CPSF4-205ENST00000440514 ALG12Q9BV10 488 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 TMEM38BQ9NVV0 291 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 ZNF224Q9NZL3 707 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 EDARQ9UNE0 448 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 CADP27708 2225 aa15.72■□□□□ 0.11
CPSF4-205ENST00000440514 CCDC168Q8NDH2 2452 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 ROS1P08922 2347 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 A6NIZ1 184 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 ATP6V1G2-DDX39BF2Z307 99 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 PPP1R3DO95685 299 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 CST1P01037 141 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 CD79AP11912 226 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 HOXB1P14653 301 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-205ENST00000440514 ZNF84P51523 738 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 IDH3GP51553 393 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-205ENST00000440514 ZNF133P52736 654 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-205ENST00000440514 RAP1BP61224 184 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 RAP1AP62834 184 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 NPRL3Q12980 569 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 TSPAN31Q12999 210 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 KRR1Q13601 381 aaKnown RBP15.71■□□□□ 0.11
CPSF4-205ENST00000440514 C10orf128Q5T292 105 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 ZNF770Q6IQ21 691 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-205ENST00000440514 SLC22A25Q6T423 547 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 B3GLCTQ6Y288 498 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 C20orf204Q6ZNR8 217 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 GNPDA2Q8TDQ7 276 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 NSMAFQ92636 917 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 SLCO4A1Q96BD0 722 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 CCL19Q99731 98 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 OR52D1Q9H346 318 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 NRIP3Q9NQ35 241 aa15.71■□□□□ 0.11
CPSF4-205ENST00000440514 CRNNQ9UBG3 495 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-205ENST00000440514 GRHPRQ9UBQ7 328 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms