RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ALG12Q9BV10 488 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 FARSAQ9Y285 508 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ARID1AO14497 2285 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM200CA6NKL6 621 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 OR5K4A6NMS3 321 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 FAM25EA8MYX2 175 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 BLOC1S5-TXNDC5H3BN57 136 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ITGA5P08648 1049 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 FAUP35544 74 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 POU3F4P49335 361 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 HOXA1P49639 335 aaPredicted RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ATP1B3P54709 279 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 MRPS10P82664 201 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 FHL5Q5TD97 284 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 LINC01590Q5TEZ4 76 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ADAMTSL4Q6UY14 1074 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 LRRC69Q6ZNQ3 347 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM17Q86X19 198 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 C12orf45Q8N5I9 185 aaPredicted RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ADAD1Q96M93 576 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 SERGEFQ9UGK8 458 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 RNF222A6NCQ9 220 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ADH1CP00326 375 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 IGKV1D-16P01601 117 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 UBBP0CG47 229 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 UBCP0CG48 685 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 AKAIN1P0CW23 69 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 GDI1P31150 447 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 RAB13P51153 203 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 UBA52P62987 128 aaKnown RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM71Q6P5X7 295 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 KRT77Q7Z794 578 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 FAM219AQ8IW50 185 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 PDCD10Q9BUL8 212 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 SLITRK2Q9H156 845 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 C19orf53Q9UNZ5 99 aaPredicted RBP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 F5P12259 2224 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 KANTRA0A1W2PQU2 76 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 F8W036 122 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 AGR2O95994 175 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 ACTL6AO96019 429 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 SPP1P10451 314 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 PVALBP20472 110 aaPredicted RBP12.3□□□□□ -0.44
PCNX3-202ENST00000439247 NFYBP25208 207 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 ALKBH1Q13686 389 aaKnown RBP12.3□□□□□ -0.44
PCNX3-202ENST00000439247 NKPD1Q17RQ9 610 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 SCGB2B2Q4G0G5 96 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM52BQ4KMG9 183 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF684Q5T5D7 378 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 DNM1P46Q6ZS02 220 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 RNF44Q7L0R7 432 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF761Q86XN6 746 aaPredicted RBP12.3□□□□□ -0.44
PCNX3-202ENST00000439247 CCDC74AQ96AQ1 378 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 SLC22A11Q9NSA0 550 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 RXFP3Q9NSD7 469 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 PLEKHA6Q9Y2H5 1048 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM82A0PJX8 343 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 SULT1C2O00338 296 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 BRINP1O60477 761 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF28P17035 718 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 ELAVL3Q14576 367 aaKnown RBP12.3□□□□□ -0.44
PCNX3-202ENST00000439247 ARHGAP40Q5TG30 622 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 PLPP7Q8NBV4 271 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 TMIEQ8NEW7 156 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 OR5T2Q8NGG2 359 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 TLNRD1Q9H1K6 362 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 KNL1Q8NG31 2342 aa12.3□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM218A2RU14 115 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 OR2T1O43869 369 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 FADS1O60427 444 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 CTSVO60911 334 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 CSF1P09603 554 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 NPBWR1P48145 328 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 CAPZA1P52907 286 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 C2orf76Q3KRA6 126 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF528Q3MIS6 628 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF425Q6IV72 752 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 FBXO42Q6P3S6 717 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF676Q8N7Q3 588 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 CLEC1AQ8NC01 280 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 PAQR8Q8TEZ7 354 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 PPP1R1CQ8WVI7 109 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 AMELYQ99218 206 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 ATG5Q9H1Y0 275 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 DNAJB12Q9NXW2 375 aaKnown RBP12.29□□□□□ -0.44
PCNX3-202ENST00000439247 CTSFQ9UBX1 484 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 CPED1A4D0V7 1026 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 AMY2AP04746 511 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 F13BP05160 661 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 GJA4P35212 333 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 DLSTP36957 453 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 AQP2P41181 271 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 CAPZA2P47755 286 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 RUNX3Q13761 415 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 IRF4Q15306 451 aa12.29□□□□□ -0.44
PCNX3-202ENST00000439247 PLEKHN1Q494U1 663 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms