RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DCTN6O00399 190 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 GLCEO94923 617 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 YES1P07947 543 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 ABOP16442 354 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 SELENOPP49908 381 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 DBPQ10586 325 aaPredicted RBP20.41■□□□□ 0.86
CPSF4-204ENST00000436336 HIST3H3Q16695 136 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 KLHL22Q53GT1 634 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 CARD17Q5XLA6 110 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 GFRALQ6UXV0 394 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 AAED1Q7RTV5 226 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 TUSC5Q8IXB3 177 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 PROKR2Q8NFJ6 384 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 WNT2BQ93097 391 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 MYDGFQ969H8 173 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 INTS12Q96CB8 462 aaKnown RBP20.41■□□□□ 0.86
CPSF4-204ENST00000436336 COPS4Q9BT78 406 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 GLRX2Q9NS18 164 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 NOSIPQ9Y314 301 aaKnown RBP20.41■□□□□ 0.86
CPSF4-204ENST00000436336 PRRC2CQ9Y520 2896 aaKnown RBP20.41■□□□□ 0.86
CPSF4-204ENST00000436336 CD8B2A6NJW9 211 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 FIGNL2A6NMB9 653 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 SLC16A7O60669 478 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 GSTT1P30711 240 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 RAB40BQ12829 278 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 NSUN5P2Q63ZY6 315 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 TSPAN14Q8NG11 270 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 OR51L1Q8NGJ5 315 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 ZNRF4Q8WWF5 429 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 TMEM54Q969K7 222 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 NMD3Q96D46 503 aaKnown RBP20.41■□□□□ 0.86
CPSF4-204ENST00000436336 RACGAP1Q9H0H5 632 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 PARPBPQ9NWS1 579 aa20.41■□□□□ 0.86
CPSF4-204ENST00000436336 ITPR1Q14643 2758 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 SLC43A1O75387 559 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 EDN3P14138 238 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 CTLA4P16410 223 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 PYCR1P32322 319 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 NTF4P34130 210 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 CSNK1A1P48729 337 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 CENPAP49450 140 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 LINC01590Q5TEZ4 76 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 CD163Q86VB7 1156 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 ZGRF1Q86YA3 2104 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 SGCDQ92629 289 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 LGALS12Q96DT0 336 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 GMPPAQ96IJ6 420 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-204ENST00000436336 RERGLQ9H628 205 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 GLTPQ9NZD2 209 aa20.4■□□□□ 0.86
CPSF4-204ENST00000436336 IGLV1-36A0A0B4J1U3 117 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 RGS10O43665 173 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 MRPS14O60783 128 aaKnown RBP20.39■□□□□ 0.86
CPSF4-204ENST00000436336 MRPL33O75394 65 aaKnown RBP20.39■□□□□ 0.86
CPSF4-204ENST00000436336 CDH15P55291 814 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 FMODQ06828 376 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 ST3GAL4Q11206 333 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 GGTLC2Q14390 218 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 B3GLCTQ6Y288 498 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 STX19Q8N4C7 294 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 OR6K6Q8NGW6 343 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 OR6N1Q8NGY5 312 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 FOXD3Q9UJU5 478 aaPredicted RBP20.39■□□□□ 0.86
CPSF4-204ENST00000436336 CLEC4AQ9UMR7 237 aa20.39■□□□□ 0.86
CPSF4-204ENST00000436336 EXOGQ9Y2C4 368 aaKnown RBP20.39■□□□□ 0.86
CPSF4-204ENST00000436336 CDK1P06493 297 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 HOXD4P09016 255 aaPredicted RBP20.39■□□□□ 0.85
CPSF4-204ENST00000436336 BLVRAP53004 296 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 POU4F2Q12837 409 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 RPTNQ6XPR3 784 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 C20orf196Q8IYI0 205 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 MCHR2Q969V1 340 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 ZMYND19Q96E35 227 aaPredicted RBP20.39■□□□□ 0.85
CPSF4-204ENST00000436336 SIGLEC11Q96RL6 698 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 FGF20Q9NP95 211 aaPredicted RBP20.39■□□□□ 0.85
CPSF4-204ENST00000436336 ERVK-18Q9QC07 812 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 ZNF835Q9Y2P0 537 aa20.39■□□□□ 0.85
CPSF4-204ENST00000436336 A0A087WXM4 84 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 EIF4E1BA6NMX2 242 aaKnown RBP20.38■□□□□ 0.85
CPSF4-204ENST00000436336 FAM171A2A8MVW0 826 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 PRRG2O14669 202 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 SS18L1O75177 396 aaPredicted RBP20.38■□□□□ 0.85
CPSF4-204ENST00000436336 KHDRBS3O75525 346 aaKnown RBP20.38■□□□□ 0.85
CPSF4-204ENST00000436336 STSP08842 583 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 ATP6V1E1P36543 226 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 ZNF133P52736 654 aaPredicted RBP20.38■□□□□ 0.85
CPSF4-204ENST00000436336 RBPJQ06330 500 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 PIGFQ07326 219 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 C1orf185Q5T7R7 199 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 OR2A2Q6IF42 318 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 ZNF773Q6PK81 442 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 B3GNT6Q6ZMB0 384 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 PRSS48Q7RTY5 328 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 OR51G2Q8NGK0 314 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 OR52I1Q8NGK6 324 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 TMEM80Q96HE8 168 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 TM9SF2Q99805 663 aa20.38■□□□□ 0.85
CPSF4-204ENST00000436336 IGKV1D-43A0A0B4J1Z2 117 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 FADS2O95864 444 aaKnown RBP20.37■□□□□ 0.85
CPSF4-204ENST00000436336 HTR1AP08908 422 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 QDPRP09417 244 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms