RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MCHR1Q99705 422 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 MRPL37Q9BZE1 423 aaKnown RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 TMEM38AQ9H6F2 299 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 METTL17Q9H7H0 456 aaPredicted RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 LPAR2Q9HBW0 351 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 NANSQ9NR45 359 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 SLC25A37Q9NYZ2 338 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 FZR1Q9UM11 496 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 MALRD1Q5VYJ5 2156 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 MGAM2Q2M2H8 2515 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 IQCMA0A1B0GVH7 501 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 CPSF4LA6NMK7 179 aaKnown RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 LYNX1G3V0Z9 82 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 MS4A18H0YCH9 400 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 M0R3H8 397 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 KPNA4O00629 521 aaPredicted RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 CHP2O43745 196 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 TPST1O60507 370 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 PTHP01270 115 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 IGHG1P01857 330 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 SERPINA5P05154 406 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 LCKP06239 509 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 MSMBP08118 114 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 LYNX1P0DP58 116 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 ZNF14P17017 642 aaPredicted RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 ITGA2P17301 1181 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 CD247P20963 164 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 IL2RGP31785 369 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 MRPL19P49406 292 aaKnown RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 IDH3AP50213 366 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 TMEM33P57088 247 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 CLRN1P58418 232 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 MRPS11P82912 194 aaKnown RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 TEKQ02763 1124 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 HSF2Q03933 536 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 RBBP4Q09028 425 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 RAB39AQ14964 217 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 MOGQ16653 247 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 TBC1D28Q2M2D7 210 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 MS4A18Q3C1V0 323 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 PCGF3Q3KNV8 242 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 SLC36A2Q495M3 483 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 PHYHD1Q5SRE7 291 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 INTS11Q5TA45 600 aaKnown RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 TTC33Q6PID6 262 aaPredicted RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 UNQ6126/PRO20091Q6UXV3 157 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 SLC35D2Q76EJ3 337 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 ZNF627Q7L945 461 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 DHDDSQ86SQ9 333 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 PATL1Q86TB9 770 aaKnown RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 SLC30A8Q8IWU4 369 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 SLC30A7Q8NEW0 376 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 OR1J2Q8NGS2 313 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 OR6X1Q8NH79 312 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 VANGL1Q8TAA9 524 aaPredicted RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 C11orf40Q8WZ69 217 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 TMEM186Q96B77 213 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 TLCD1Q96CP7 247 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 RAB39BQ96DA2 213 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 TIMD4Q96H15 378 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 SLC25A44Q96H78 314 aaPredicted RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 TXNDC15Q96J42 360 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 MPP4Q96JB8 637 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 SOX7Q9BT81 388 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 CCDC28BQ9BUN5 200 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 KCNN2Q9H2S1 579 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 OR51B6Q9H340 312 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 ZNF385DQ9H6B1 395 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 BRD7Q9NPI1 651 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 HINT3Q9NQE9 182 aaKnown RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 HIF1ANQ9NWT6 349 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 B3GNT2Q9NY97 397 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 SLCO1C1Q9NYB5 712 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 TREM2Q9NZC2 230 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 GLTPQ9NZD2 209 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 VAPAQ9P0L0 249 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 LEF1Q9UJU2 399 aaPredicted RBP6.67□□□□□ -1.34
VPS50-203ENST00000436177 TRIM33Q9UPN9 1127 aa6.67□□□□□ -1.34
VPS50-203ENST00000436177 A0A0A6YYJ9 748 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 TRAV20A0A0B4J274 112 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 A0A1W2PRG6 482 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 TMEM129A0AVI4 362 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 TRAPPC13A5PLN9 417 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 LRRN3E7EW58 273 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 CH25HO95992 272 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 BCL10O95999 233 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 HPXP02790 462 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 OPN1SWP03999 348 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 NAT2P11245 290 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 NR2C1P13056 603 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 ZNF35P13682 527 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 ANPEPP15144 967 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 HOXB9P17482 250 aaPredicted RBP6.66□□□□□ -1.34
VPS50-203ENST00000436177 GPX2P18283 190 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 APLNRP35414 380 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 RAD52P43351 418 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 ATP4BP51164 291 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 DAP3P51398 398 aaKnown RBP6.66□□□□□ -1.34
VPS50-203ENST00000436177 NFYCQ13952 458 aa6.66□□□□□ -1.34
VPS50-203ENST00000436177 MELKQ14680 651 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms