RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TSPAN32Q96QS1 320 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 FOXB1Q99853 325 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 TMCC3Q9ULS5 477 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 EDARQ9UNE0 448 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 MGAT4BQ9UQ53 548 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 AURKCQ9UQB9 309 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 POFUT2Q9Y2G5 429 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 CELSR1Q9NYQ6 3014 aa16.04■□□□□ 0.16
HLA-F-220ENST00000434407 UNC119BA6NIH7 251 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 SHISA9B4DS77 424 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 TNFRSF11BO00300 401 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 HS3ST1O14792 307 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 DHHO43323 396 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 NDUFB2O95178 105 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 ATE1O95260 518 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 QDPRP09417 244 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 ZNF83P51522 516 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 CLRN1P58418 232 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 UBE2NP61088 152 aaKnown RBP16.03■□□□□ 0.16
HLA-F-220ENST00000434407 C10orf128Q5T292 105 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 ZNF770Q6IQ21 691 aaPredicted RBP16.03■□□□□ 0.16
HLA-F-220ENST00000434407 PGBD2Q6P3X8 592 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 THSD4Q6ZMP0 1018 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 IGFN1Q86VF2 1251 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 LINC00471Q8N535 108 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 MCHR2Q969V1 340 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 MBD6Q96DN6 1003 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 ALG12Q9BV10 488 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 KATNB1Q9BVA0 655 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 CHID1Q9BWS9 393 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 MOV10Q9HCE1 1003 aaKnown RBP16.03■□□□□ 0.16
HLA-F-220ENST00000434407 NRIP3Q9NQ35 241 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 VNN3Q9NY84 501 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 B3GNT2Q9NY97 397 aa16.03■□□□□ 0.16
HLA-F-220ENST00000434407 ITPR3Q14573 2671 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 ZNF503-AS2A6NEH8 195 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 A6NIZ1 184 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 OR10H3O60404 316 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 IGKV3-15P01624 115 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 IGLV1-44P01699 117 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 RAF1P04049 648 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 CD53P19397 219 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 ACVR1BP36896 505 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 IFNGR2P38484 337 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 RAP1BP61224 184 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 RAP1AP62834 184 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 GK3PQ14409 553 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 ZNF813Q6ZN06 617 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 C20orf204Q6ZNR8 217 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 ASRGL1Q7L266 308 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 ARIH2OSQ8N7S6 290 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 SYT14Q8NB59 555 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 PAPD5Q8NDF8 572 aaKnown RBP16.02■□□□□ 0.16
HLA-F-220ENST00000434407 IGFBPL1Q8WX77 278 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 RADILQ96JH8 1075 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 C1QTNF6Q9BXI9 259 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 NDEL1Q9GZM8 345 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 SMURF2Q9HAU4 748 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 CCM2LQ9NUG4 571 aaPredicted RBP16.02■□□□□ 0.16
HLA-F-220ENST00000434407 ZNF224Q9NZL3 707 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 PLEKHA6Q9Y2H5 1048 aa16.02■□□□□ 0.16
HLA-F-220ENST00000434407 VPS13CQ709C8 3753 aa16.02■□□□□ 0.15
HLA-F-220ENST00000434407 ERICH4A6NGS2 130 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 M0R1B8 84 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 ABCD4O14678 606 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 SEC14L2O76054 403 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 B4GALT1P15291 398 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 CBR1P16152 277 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 IST1P53990 364 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 ERVK-25P63136 954 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 TSPAN31Q12999 210 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 TOP3AQ13472 1001 aaPredicted RBP16.01■□□□□ 0.15
HLA-F-220ENST00000434407 NRN1LQ496H8 165 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 ZNF672Q499Z4 452 aaPredicted RBP16.01■□□□□ 0.15
HLA-F-220ENST00000434407 SLC25A47Q6Q0C1 308 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 DPY19L2P2Q6ZN68 376 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 SPATA24Q86W54 205 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 ZNF611Q8N823 705 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 KBTBD8Q8NFY9 601 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 FNDC8Q8TC99 324 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 GNPDA2Q8TDQ7 276 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 AKAP1Q92667 903 aaKnown RBP eCLIP16.01■□□□□ 0.15
HLA-F-220ENST00000434407 ZNF75AQ96N20 296 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 UBTD1Q9HAC8 227 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 TMEM38BQ9NVV0 291 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 ADAM18Q9Y3Q7 739 aa16.01■□□□□ 0.15
HLA-F-220ENST00000434407 IGKV1D-43A0A0B4J1Z2 117 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 IGHV1-18A0A0C4DH31 117 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 AHCYL1O43865 530 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 TXNDC12O95881 172 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 NR2C1P13056 603 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 APEHP13798 732 aaKnown RBP16■□□□□ 0.15
HLA-F-220ENST00000434407 DNASE1P24855 282 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 RPL4P36578 427 aaKnown RBP16■□□□□ 0.15
HLA-F-220ENST00000434407 TUBA1BP68363 451 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 TUBA4AP68366 448 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 MYBPC1Q00872 1141 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 TESK1Q15569 626 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 MICAQ29983 383 aa16■□□□□ 0.15
HLA-F-220ENST00000434407 THEM4Q5T1C6 240 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms