RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TACSTD2P09758 323 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF888P0CJ79 500 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 AKR1C4P17516 323 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 TGIF1Q15583 401 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 GFOD2Q3B7J2 385 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ATPAF1Q5TC12 328 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ANKRD16Q6P6B7 361 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 FOXN4Q96NZ1 517 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 SPSB2Q99619 263 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF251Q9BRH9 671 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 CHRNA9Q9UGM1 479 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 KLHDC2Q9Y2U9 406 aa10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-202ENST00000433297 FITM1A5D6W6 292 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 VEGFDO43915 354 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 DOK2O60496 412 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 AGR2O95994 175 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 CYB5AP00167 134 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 SDHAP31040 664 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 HSD17B2P37059 387 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 CCR2P41597 374 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 CENPAP49450 140 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 ADAM8P78325 824 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 FABP9Q0Z7S8 132 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF704Q6ZNC4 412 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 BIVMQ86UB2 503 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 CLEC1AQ8NC01 280 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 ZC3H10Q96K80 434 aaKnown RBP10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 MENTQ9BUN1 341 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 MRI1Q9BV20 369 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 PITHD1Q9GZP4 211 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF350Q9GZX5 532 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 GHRLQ9UBU3 117 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 TINAGQ9UJW2 476 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 SPINT1O43278 529 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 FGF18O76093 207 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 WNT11O96014 354 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 ITGA5P08648 1049 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 IL13RA1P78552 427 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 EIF2B1Q14232 305 aaKnown RBP10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 METRNLQ641Q3 311 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 OR10K2Q6IF99 312 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 C5orf46Q6UWT4 87 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 PGAP1Q75T13 922 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 OR5AP2Q8NGF4 316 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 ELP5Q8TE02 316 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 COMMD4Q9H0A8 199 aa10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 MKI67P46013 3256 aaKnown RBP10.51□□□□□ -0.73
HMGCS1-202ENST00000433297 EIF1BO60739 113 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 GPANK1O95872 356 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ITGB2P05107 769 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 THBS1P07996 1170 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ST6GAL1P15907 406 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF14P17017 642 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 EIF1P41567 113 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 RAB28P51157 221 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 TAS2R19P59542 299 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 CXADRP78310 365 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 HABP2Q14520 560 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 IRF4Q15306 451 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ELAVL1Q15717 326 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 MLF2Q15773 248 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 CDNFQ49AH0 187 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 KRBOX4Q5JUW0 171 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 TMEM200AQ86VY9 491 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 NPEPL1Q8NDH3 523 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 OR4A4PQ8NGN8 299 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 OR6N2Q8NGY6 317 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 CXorf40AQ8TE69 158 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 CCDC74AQ96AQ1 378 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 FAM3DQ96BQ1 224 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 PHYHIPLQ96FC7 376 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ICAM5Q9UMF0 924 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 MTCL1Q9Y4B5 1905 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 TRBV23OR9-2A0A075B6M9 112 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF736B4DX44 427 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 SULT2B1O00204 365 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 TGM5O43548 720 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ABOP16442 354 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 EMDP50402 254 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC29A4Q7RTT9 530 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 LMAN2LQ9H0V9 348 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 RPS10P5Q9NQ39 176 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 LAMP5Q9UJQ1 280 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 CSAG2Q9Y5P2 127 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 MDC1Q14676 2089 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 CDC40O60508 579 aaKnown RBP eCLIP10.5□□□□□ -0.735e-9■□□□□ 8.6
HMGCS1-202ENST00000433297 C8AP07357 584 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 TPT1P13693 172 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ADRB3P13945 408 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ACTBP60709 375 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ACTG1P63261 375 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 ZIC1Q15915 447 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 PPP1R14AQ96A00 147 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 CLCC1Q96S66 551 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 RSPH9Q9H1X1 276 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 MRM2Q9UI43 246 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 MSRAQ9UJ68 235 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms