RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ALKAL1Q6UXT8 129 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 PLPP5Q8NEB5 264 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 PCNPQ8WW12 178 aaKnown RBP14.18□□□□□ -0.14
PTPRF-206ENST00000429895 HES7Q9BYE0 225 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 FAM117AQ9C073 453 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 OSGIN2Q9Y236 505 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 GPRIN2O60269 458 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 UBE2G2P60604 165 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 PRTGQ2VWP7 1150 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 TRNP1Q6NT89 227 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 DEFB108BQ8NET1 73 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 SLC37A2Q8TED4 501 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 ZIC5Q96T25 663 aa14.18□□□□□ -0.14
PTPRF-206ENST00000429895 PATZ1Q9HBE1 687 aaKnown RBP14.18□□□□□ -0.14
PTPRF-206ENST00000429895 PRRG2O14669 202 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 RGS11O94810 467 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 GLYATL3Q5SZD4 288 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 SLC48A1Q6P1K1 146 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 TMEM104Q8NE00 496 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 WFDC5Q8TCV5 224 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 RPL3LQ92901 407 aaKnown RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 P2RY12Q9H244 342 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 CEPT1Q9Y6K0 416 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 DLG5Q8TDM6 1919 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 TLE4Q04727 773 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 KCNJ8Q15842 424 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 NAXDQ8IW45 347 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 RNF170Q96K19 258 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 BANF2Q9H503 90 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 PURGQ9UJV8 347 aaKnown RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 HRH3Q9Y5N1 445 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 NPY4RP50391 375 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 TBCEQ15813 527 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 SFXN4Q6P4A7 337 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 FAM185AQ8N0U4 392 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 UBAC2Q8NBM4 344 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 MITD1Q8WV92 249 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 RANGRFQ9HD47 186 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 NECAP2Q9NVZ3 263 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 HS3ST3A1Q9Y663 406 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 MYH13Q9UKX3 1938 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 MYH3P11055 1940 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 ZBTB42B2RXF5 422 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 AIPO00170 330 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 ELAVL4P26378 380 aaKnown RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 SLC35A2P78381 396 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 DUSP2Q05923 314 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 GALEQ14376 348 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 TMEM52BQ4KMG9 183 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 CST9Q5W186 159 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 RBMS3Q6XE24 437 aaKnown RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 DPPA2Q7Z7J5 298 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 CATSPERDQ86XM0 798 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 C8orf44Q96CB5 159 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 EMC7Q9NPA0 242 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 CGGBP1Q9UFW8 167 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 KLKB1P03952 638 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 CGB2Q6NT52 195 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 RPS19BP1Q86WX3 136 aaKnown RBP14.17□□□□□ -0.14
PTPRF-206ENST00000429895 CRYGNQ8WXF5 182 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 OR1E3Q8WZA6 343 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 ARPC5LQ9BPX5 153 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 ARV1Q9H2C2 271 aa14.17□□□□□ -0.14
PTPRF-206ENST00000429895 LRP6O75581 1613 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 ZNF816-ZNF321PA0A0X1KG74 233 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 CSO75390 466 aaKnown RBP14.16□□□□□ -0.14
PTPRF-206ENST00000429895 PMPCAQ10713 525 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 IL10RAQ13651 578 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 LPCAT3Q6P1A2 487 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 LRRC56Q8IYG6 542 aaPredicted RBP14.16□□□□□ -0.14
PTPRF-206ENST00000429895 ZNF321PQ8N8H1 164 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 C11orf40Q8WZ69 217 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 NAA50Q9GZZ1 169 aaKnown RBP14.16□□□□□ -0.14
PTPRF-206ENST00000429895 PCYT1BQ9Y5K3 369 aaPredicted RBP14.16□□□□□ -0.14
PTPRF-206ENST00000429895 GPR171O14626 319 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 GUSBP08236 651 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 SSX9Q7RTT3 188 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 OR1S2Q8NGQ3 325 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 GAB3Q8WWW8 586 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 OR2M2Q96R28 347 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 DHRS4Q9BTZ2 278 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 MED17Q9NVC6 651 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 MICAL3Q7RTP6 2002 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 MYH6P13533 1939 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 TAPBPO15533 448 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 TGM1P22735 817 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 LACC1Q8IV20 430 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 GJC3Q8NFK1 279 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 LRFN5Q96NI6 719 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 AMBRA1Q9C0C7 1298 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 PLK3Q9H4B4 646 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 CBR1P16152 277 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 NXNL2Q5VZ03 156 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 H1FNTQ75WM6 255 aaPredicted RBP14.16□□□□□ -0.14
PTPRF-206ENST00000429895 OR51H1Q8NH63 302 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 A4GALTQ9NPC4 353 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 PAX6P26367 422 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 POLR2IP36954 125 aaKnown RBP14.16□□□□□ -0.14
PTPRF-206ENST00000429895 RAB13P51153 203 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms