RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 RAP1AP62834 184 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 DMWDQ09019 674 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 FAM199XQ6PEV8 388 aaPredicted RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 LINGO2Q7L985 606 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 APCDD1LQ8NCL9 501 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 OR5L2Q8NGL0 311 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 S100A16Q96FQ6 103 aaKnown RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 SLA2Q9H6Q3 261 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 NUDT15Q9NV35 164 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 MCUBQ9NWR8 336 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 PAQR5Q9NXK6 330 aaPredicted RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 SUSD2Q9UGT4 822 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 ATXN7L1Q9ULK2 861 aaPredicted RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 TRBV5-7A0A0A0MS05 114 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 IGHV3-20A0A0C4DH32 117 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 C7orf66A4D0T2 115 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 CPED1A4D0V7 1026 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ANXA2P2A6NMY6 339 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 GABARAPH6UMI1 98 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 GPR171O14626 319 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 SLC16A7O60669 478 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 TCRBP04435 133 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ANXA2P07355 339 aaKnown RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 APOBEC1P41238 236 aaKnown RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 SOX2P48431 317 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 CCR9P51686 369 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 RAG2P55895 527 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 DCDP81605 110 aaKnown RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 RNASE12Q5GAN4 147 aaKnown RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 BCL2L15Q5TBC7 163 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 GUSBP11Q6P575 273 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 KCTD18Q6PI47 426 aaPredicted RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 DNM1P34Q6PK57 102 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ESPNLQ6ZVH7 1005 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 FCRLAQ7L513 359 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ZNF227Q86WZ6 799 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ZNF454Q8N9F8 522 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 OR8K3Q8NH51 312 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 SLC25A38Q96DW6 304 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 C4orf45Q96LM5 186 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ZNF587Q96SQ5 575 aaPredicted RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 ACTR6Q9GZN1 396 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 GALNT9Q9HCQ5 603 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 KLHL9Q9P2J3 617 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 IGLV1-36A0A0B4J1U3 117 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 SLC22A23A1A5C7 686 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 TRABD2BA6NFA1 517 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 NAP1L6A6NFF2 107 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 CYC1P08574 325 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ZNF24P17028 368 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 S100A1P23297 94 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 STOMP27105 288 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 GDNFP39905 211 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 MNDAP41218 407 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 DAP3P51398 398 aaKnown RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 ART1P52961 327 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 FBXW4P57775 412 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 GLO1Q04760 184 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 SNTB2Q13425 540 aaKnown RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 KLF9Q13886 244 aaPredicted RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 FAM205BPQ63HN1 556 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 PAPD4Q6PIY7 484 aaKnown RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 ZNF574Q6ZN55 896 aaPredicted RBP12.34□□□□□ -0.43
THBS3-202ENST00000428962 KANSL1Q7Z3B3 1105 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ZNF679Q8IYX0 411 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 CEP76Q8TAP6 659 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 C17orf50Q8WW18 174 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 TTC9Q92623 222 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ORAI1Q96D31 301 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 NXPE2Q96DL1 559 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 DNAJA3Q96EY1 480 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 OR2M2Q96R28 347 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 CACNG6Q9BXT2 260 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 MED28Q9H204 178 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ELOVL3Q9HB03 270 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 ANKRD10Q9NXR5 420 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 SLCO1C1Q9NYB5 712 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 STMN3Q9NZ72 180 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 OR5V1Q9UGF6 321 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 FER1L5A0AVI2 2057 aa12.34□□□□□ -0.43
THBS3-202ENST00000428962 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 A0A0A6YYJ9 748 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 CCDC163A0A0D9SF12 145 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 TRBV11-1A0A0K0K1C0 115 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 NPIPB13A6NJU9 1138 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 NPIPB4C9JG80 1138 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 ADAM10O14672 748 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 LDOC1O95751 146 aaPredicted RBP12.33□□□□□ -0.44
THBS3-202ENST00000428962 ONECUT2O95948 504 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 SPARCP09486 303 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 MAP2K6P52564 334 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 EMP2P54851 167 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 DLX5P56178 289 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 ADAM8P78325 824 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 INSM1Q01101 510 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms