RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 AP3M1Q9Y2T2 418 aa13.35□□□□□ -0.27
CTDSP1-202ENST00000428361 SH3GLB1Q9Y371 365 aa13.35□□□□□ -0.27
CTDSP1-202ENST00000428361 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.275e-8■■■■□ 25.6
CTDSP1-202ENST00000428361 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 OR5F1O95221 314 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 TGFAP01135 160 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 MT-ND1P03886 318 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 ADRA2AP08913 450 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 TACSTD2P09758 323 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 PLP2Q04941 152 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 UNQ6126/PRO20091Q6UXV3 157 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 WDR88Q6ZMY6 472 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 CARM1Q86X55 608 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 CDK20Q8IZL9 346 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 TMEM120AQ9BXJ8 343 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 RNF121Q9H920 327 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
CTDSP1-202ENST00000428361 DNHD1Q96M86 4753 aa13.33□□□□□ -0.27
CTDSP1-202ENST00000428361 IQCMA0A1B0GVH7 501 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 A0A1W2PPW3 197 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 BLOC1S5-TXNDC5H3BN57 136 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 MRASO14807 208 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 PHF1O43189 567 aaPredicted RBP13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 LYPD3O95274 346 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 PGA4P0DJD7 388 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 PGA3P0DJD8 388 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 IGFBP5P24593 272 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 APEX1P27695 318 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 ARFIP2P53365 341 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 MOGQ16653 247 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 TBC1D28Q2M2D7 210 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 SLC16A14Q7RTX9 510 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 RBM45Q8IUH3 476 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 NOXO1Q8NFA2 376 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 FNDC8Q8TC99 324 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 SNX33Q8WV41 574 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 LZICQ8WZA0 190 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 SGTBQ96EQ0 304 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 ZNF75AQ96N20 296 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 CDH20Q9HBT6 801 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 ZNF224Q9NZL3 707 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 MED31Q9Y3C7 131 aa13.33□□□□□ -0.28
CTDSP1-202ENST00000428361 NPIPB13A6NJU9 1138 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 NPIPB4C9JG80 1138 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 SLC22A2O15244 555 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 OR7A10O76100 309 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 MT-ND5P03915 603 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 THY1P04216 161 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 QDPRP09417 244 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 H2AFXP16104 143 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 RAD52P43351 418 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 GZMMP51124 257 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 MRPS11P82912 194 aaKnown RBP13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 MELKQ14680 651 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 RAB39AQ14964 217 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 TAF11Q15544 211 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 FXNQ16595 210 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 FAM120AOSQ5T036 256 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 RGS7BPQ6MZT1 257 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 DEF8Q6ZN54 512 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 ARPINQ7Z6K5 226 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 CALHM3Q86XJ0 350 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 SKA3Q8IX90 412 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 LINC01356Q8N9X3 169 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 OR4D11Q8NGI4 311 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 TMEM239Q8WW34 195 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 BCL2L14Q9BZR8 327 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 TPK1Q9H3S4 243 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 SMURF2Q9HAU4 748 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 INIPQ9NRY2 104 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 SLCO1C1Q9NYB5 712 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 MALRD1Q5VYJ5 2156 aa13.32□□□□□ -0.28
CTDSP1-202ENST00000428361 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 FAM220BPB1ANY3 271 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 FBP2O00757 339 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 SNAP29O95721 258 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 FUT1P19526 365 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 ACHEP22303 614 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 GUCA1AP43080 201 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 RPL18Q07020 188 aaKnown RBP13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 ST3GAL3Q11203 375 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 KLF10Q13118 480 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 RIN1Q13671 783 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 NKPD1Q17RQ9 610 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 RABL3Q5HYI8 236 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 LRFN4Q6PJG9 635 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 LRRC17Q8N6Y2 441 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 RBM15BQ8NDT2 890 aaKnown RBP13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 OR4K5Q8NGD3 323 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 LIPHQ8WWY8 451 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 C11orf40Q8WZ69 217 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 RDH5Q92781 318 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 SYT3Q9BQG1 590 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 PRSS27Q9BQR3 290 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 ZNF416Q9BWM5 594 aa13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 MEPEQ9NQ76 525 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-202ENST00000428361 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms