RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TRA2AQ13595 282 aaKnown RBP eCLIP5.29□□□□□ -1.56
HERC4-206ENST00000427635 P2RY14Q15391 338 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 C22orf42Q6IC83 251 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TMPRSS11FQ6ZWK6 438 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SELENOHQ8IZQ5 122 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 CLDN22Q8N7P3 220 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 OR51A2Q8NGJ7 313 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 OR5M9Q8NGP3 310 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 RND1Q92730 232 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 RPL3LQ92901 407 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 SLC35A4Q96G79 324 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 RDH12Q96NR8 316 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 FOXN4Q96NZ1 517 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 AMBRA1Q9C0C7 1298 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TRGV5A0A0B4J1U4 118 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SERINC4A6NH21 518 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 METTL15A6NJ78 407 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 HS3ST1O14792 307 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ARPC3O15145 178 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 AKR7A2O43488 359 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 EEDO75530 441 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 EPXP11678 715 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 CKMT2P17540 419 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 PROZP22891 400 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 PBX1P40424 430 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 CCL7P80098 99 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 MAP4K2Q12851 820 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 OLIG2Q13516 323 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 C6orf136Q5SQH8 315 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ZNF362Q5T0B9 420 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 UNQ9370/PRO34162Q6UXP9 181 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TIFABQ6ZNK6 161 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 KDM8Q8N371 416 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 C17orf78Q8N4C9 275 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SUMF2Q8NBJ7 301 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 OR10J5Q8NHC4 309 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SECTM1Q8WVN6 248 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 HPSE2Q8WWQ2 592 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 RAB1CQ92928 201 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 MVB12AQ96EY5 273 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 FYTTD1Q96QD9 318 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 RSRP1Q9BUV0 290 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ABHD6Q9BV23 337 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 RPS10-NUDT3A0A1W2PQS6 291 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 TCRBV7S3A2A0A539 114 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 RPL7P18124 248 aaKnown RBP5.28□□□□□ -1.56
HERC4-206ENST00000427635 FPR2P25090 351 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 AQP2P41181 271 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 PTGIRP43119 386 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 NKX6-1P78426 367 aaPredicted RBP5.28□□□□□ -1.56
HERC4-206ENST00000427635 SOX4Q06945 474 aaPredicted RBP5.28□□□□□ -1.56
HERC4-206ENST00000427635 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.28□□□□□ -1.564e-6■■■■□ 20.5
HERC4-206ENST00000427635 TUSC1Q2TAM9 212 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 PIP5KL1Q5T9C9 394 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 FAM199XQ6PEV8 388 aaPredicted RBP5.28□□□□□ -1.56
HERC4-206ENST00000427635 WDR88Q6ZMY6 472 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ERMP1Q7Z2K6 904 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 NAXDQ8IW45 347 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ZFP82Q8N141 532 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 TMEM171Q8WVE6 324 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 CNTNAP3BQ96NU0 1288 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 TMEM246Q9BRR3 403 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 C1QTNF2Q9BXJ5 285 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 KIR3DX1Q9H7L2 352 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 C5AR2Q9P296 337 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 BTNL2Q9UIR0 455 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ZNF593O00488 134 aaPredicted RBP5.28□□□□□ -1.56
HERC4-206ENST00000427635 HPRP00739 348 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 MAKP20794 623 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 PRKACGP22612 351 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 OR5I1Q13606 314 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 AANATQ16613 207 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 HLA-BQ31612 363 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ARHGAP11BQ3KRB8 267 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 OGFOD3Q6PK18 319 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 OR6V1Q8N148 313 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 CANT1Q8WVQ1 401 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ASB5Q8WWX0 329 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 CPNE4Q96A23 557 aaPredicted RBP5.28□□□□□ -1.56
HERC4-206ENST00000427635 TAMM41Q96BW9 452 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 INMT-MINDY4F8WBC2 141 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 TSTD3H0UI37 97 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 IMPA2O14732 288 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 UBL3O95164 117 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ADRA1AP35348 466 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ETV6P41212 452 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 SLC18A1P54219 525 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 UBE2KP61086 200 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 SPOCK1Q08629 439 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 SSPNQ14714 243 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 ZNF74Q16587 644 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 MEP1BQ16820 701 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 TMEM52BQ4KMG9 183 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 PRAMEF5Q5TYX0 476 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 PRAMEF6Q5VXH4 476 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 B3GNTL1Q67FW5 361 aaPredicted RBP5.28□□□□□ -1.56
HERC4-206ENST00000427635 C18orf63Q68DL7 685 aa5.28□□□□□ -1.56
HERC4-206ENST00000427635 CLEC9AQ6UXN8 241 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms