RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 Q6ZSR6 202 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 C15orf40Q8WUR7 153 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 KLHL15Q96M94 604 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 LPAR4Q99677 370 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 ATG5Q9H1Y0 275 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 OR10A5Q9H207 317 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 C12orf10Q9HB07 376 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 SDK1Q7Z5N4 2213 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 RNH1P13489 461 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 HNRNPA2B1P22626 353 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 RPS4XP62701 263 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 RPL18Q07020 188 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 IL10RAQ13651 578 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 GK2Q14410 553 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 TSSK4Q6SA08 328 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 CFAP77Q6ZQR2 320 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 KCTD20Q7Z5Y7 419 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 TAF8Q7Z7C8 310 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 PLPP7Q8NBV4 271 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 RELL2Q8NC24 303 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 SCARB1Q8WTV0 552 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 PPP1R14AQ96A00 147 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 PNPLA2Q96AD5 504 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 AMELYQ99218 206 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 MFFQ9GZY8 342 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 ZMAT3Q9HA38 289 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 YBX2Q9Y2T7 364 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 A0A1W2PQF6 199 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 OR4C45A6NMZ5 311 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 DOK2O60496 412 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 LDOC1O95751 146 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 CSN2P05814 226 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 PPP3CBP16298 524 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 FNTBP49356 437 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 MED25Q71SY5 747 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF627Q7L945 461 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 KTI12Q96EK9 354 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 WBP1Q96G27 269 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 KCNG2Q9UJ96 466 aa13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 MRPS33Q9Y291 106 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-203ENST00000419007 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 NPIPB9F8W1W9 429 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 SIGLEC5O15389 551 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 CTAG2O75638 210 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 IGF2P01344 180 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 CSF1P09603 554 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 GABRA1P14867 456 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 PRSS3P35030 304 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 PSMD4P55036 377 aaKnown RBP13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 DHODHQ02127 395 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 SIGLEC14Q08ET2 396 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 ARHGAP40Q5TG30 622 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 PM20D2Q8IYS1 436 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 STPG2Q8N412 459 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF454Q8N9F8 522 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 EVA1AQ9H8M9 152 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 MOKQ9UQ07 419 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 MYO15AQ9UKN7 3530 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 TUBAL3A6NHL2 446 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 CLDN4O14493 209 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 NUDT14O95848 222 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 APOC3P02656 99 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 MNDAP41218 407 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 LRRC37A5PQ49AS3 106 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 WBP2NLQ6ICG8 309 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 SLC36A1Q7Z2H8 476 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 PRR22Q8IZ63 422 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 PMEPA1Q969W9 287 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 SLC25A36Q96CQ1 311 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 KLHDC3Q9BQ90 382 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 MMP25Q9NPA2 562 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 SLC22A13Q9Y226 551 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
SEMA3B-203ENST00000419007 RENP00797 406 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 ITGA5P08648 1049 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 AKAIN1P0CW23 69 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 MESTQ5EB52 335 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 FAM122BQ7Z309 247 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 KRT77Q7Z794 578 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 PDZD9Q8IXQ8 264 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 PRSS35Q8N3Z0 413 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 PHOSPHO2Q8TCD6 241 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 INTS14Q96SY0 518 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 TMPRSS13Q9BYE2 586 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 HIF3AQ9Y2N7 669 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 TRIOO75962 3097 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 M0QYG6 137 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 POU2F2P09086 479 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 LIPCP11150 499 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 C2orf76Q3KRA6 126 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 CDC20BQ86Y33 519 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 MCATQ8IVS2 390 aaKnown RBP13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 LHFPL5Q8TAF8 219 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 RPS4Y2Q8TD47 263 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 MMABQ96EY8 250 aaPredicted RBP13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 TSPAN32Q96QS1 320 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 PBX4Q9BYU1 374 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 NKX2-4Q9H2Z4 354 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms