RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ZNF454Q8N9F8 522 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ZIC4Q8N9L1 334 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF610Q8N9Z0 462 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 LRRC75AQ8NAA5 344 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 PROKR2Q8NFJ6 384 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 OR10H5Q8NGA6 315 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 OR2T4Q8NH00 348 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF519Q8TB69 540 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 NSMAFQ92636 917 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 HDAC2Q92769 488 aaKnown RBP7.49□□□□□ -1.21
TRIM48-201ENST00000417545 STARD4Q96DR4 205 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 LRR1Q96L50 414 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 NMNAT3Q96T66 252 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 LINC00470Q9BZP3 86 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 SYT4Q9H2B2 425 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 KCNN2Q9H2S1 579 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 Q9H521 79 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 SEC61A2Q9H9S3 476 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 RPRD1BQ9NQG5 326 aaKnown RBP7.49□□□□□ -1.21
TRIM48-201ENST00000417545 CMC2Q9NRP2 79 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 PLSCR4Q9NRQ2 329 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ING1Q9UK53 422 aaPredicted RBP7.49□□□□□ -1.21
TRIM48-201ENST00000417545 POLR1DQ9Y2S0 133 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 FAM208BQ5VWN6 2430 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 LOC100130705A0A1B0GUX0 176 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 SNTNA6NMZ2 147 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 ZAR1LA6NP61 321 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 KHDRBS3O75525 346 aaKnown RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 UPK3AO75631 287 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CLDN14O95500 239 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CNOT4O95628 575 aaKnown RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 TXNDC12O95881 172 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 TP53P04637 393 aaPredicted RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 PGA4P0DJD7 388 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 PGA3P0DJD8 388 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF26P17031 533 aaPredicted RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 GGT2P36268 569 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 PCYT1AP49585 367 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 AQP4P55087 323 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 SH3BGRP55822 239 aaPredicted RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CDK5Q00535 292 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 FMODQ06828 376 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 FHL1Q13642 323 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CRMP1Q14194 572 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 GUSBP1Q15486 140 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 STK11Q15831 433 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CEACAM16Q2WEN9 425 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 KLHL12Q53G59 568 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 LCN1P1Q5VSP4 162 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 ACSM5Q6NUN0 579 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 Q6ZT83 130 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CXXC5Q7LFL8 322 aaKnown RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 C20orf196Q8IYI0 205 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 TMEM123Q8N131 208 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 TCEANCQ8N8B7 351 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CYB561A3Q8NBI2 242 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 RELL2Q8NC24 303 aaPredicted RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 SLC37A3Q8NCC5 494 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 OR9Q1Q8NGQ5 310 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 OR6K6Q8NGW6 343 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 NRG4Q8WWG1 115 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 NANOS1Q8WY41 292 aaKnown RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 KISS1RQ969F8 398 aaPredicted RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 TMEM54Q969K7 222 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 SNX18Q96RF0 628 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 MBOAT4Q96T53 435 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 ADI1Q9BV57 179 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 GRIP2Q9C0E4 1043 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 OR51V1Q9H2C8 321 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 FN3KQ9H479 309 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 CRLF2Q9HC73 371 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 GPR35Q9HC97 309 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 SRA1Q9HD15 236 aaKnown RBP7.48□□□□□ -1.21
TRIM48-201ENST00000417545 SLC7A10Q9NS82 523 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 FAM118AQ9NWS6 357 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 GALNT8Q9NY28 637 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 TAS2R16Q9NYV7 291 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 GPR52Q9Y2T5 361 aa7.48□□□□□ -1.21
TRIM48-201ENST00000417545 MYO7BQ6PIF6 2116 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 PRRC2CQ9Y520 2896 aaKnown RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 SLC22A23A1A5C7 686 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 NKX2-6A6NCS4 301 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 FAM183AA6NL82 134 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 H0YJX3 145 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 M0R129 80 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 SURF4O15260 269 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 DHHO43323 396 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 TLX2O43763 284 aaPredicted RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 MPZL2O60487 215 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 RAD51DO75771 328 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 LYZL6O75951 148 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF432O94892 652 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 SLC2A10O95528 541 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF823P16415 610 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 AGAP20933 346 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 MPGP29372 298 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 POLR2IP36954 125 aaKnown RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 CAPGP40121 348 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 CD79BP40259 229 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms