RNA–Protein interactions for RNA: ENST00000416553.1

AP002856.2-201, humanhuman

TSL 3 BASIC

Gene AP002856.2, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-201ENST00000416553 CMTM5Q96DZ9 223 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 ZNF347Q96SE7 839 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 SEPHS2Q99611 448 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 DOK1Q99704 481 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 SH3GL3Q99963 347 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 MAN2C1Q9NTJ4 1040 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 RHCGQ9UBD6 479 aa11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 CHD3Q12873 2000 aaKnown RBP11.69□□□□□ -0.54
AP002856.2-201ENST00000416553 HTR3EA5X5Y0 456 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 MCIDASD6RGH6 385 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 hCG_2039718K7EN88 272 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 NDUFAB1O14561 156 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 SNX3O60493 162 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 TRMUO75648 421 aaKnown RBP11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 UBL3O95164 117 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 SERPINA1P01009 418 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 IFNW1P05000 195 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 IFI30P13284 250 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 ACADSP16219 412 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 MAKP20794 623 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 IFNA8P32881 189 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 DAP3P51398 398 aaKnown RBP11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 PSME3P61289 254 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 PPP2R2BQ00005 443 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 MYBPC1Q00872 1141 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 SNTB2Q13425 540 aaKnown RBP11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 RAB39AQ14964 217 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 ARMC4Q5T2S8 1044 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 KRT80Q6KB66 452 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 ZNF584Q8IVC4 421 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 GEMIN6Q8WXD5 167 aaKnown RBP11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 KCTD14Q9BQ13 255 aaPredicted RBP11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 FNDC11Q9BVV2 318 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 ABCD2Q9UBJ2 740 aa11.68□□□□□ -0.54
AP002856.2-201ENST00000416553 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 CENPBD1B2RD01 187 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 CD5LO43866 347 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 ENTPD5O75356 428 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 PRSS23O95084 383 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 RAB36O95755 333 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 SERPINA5P05154 406 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 CSF3P09919 207 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 SLC25A16P16260 332 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 NCK1P16333 377 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 PRDX6P30041 224 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 LSP1P33241 339 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 PPOXP50336 477 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 ZNF133P52736 654 aaPredicted RBP11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 PRKCDQ05655 676 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 LOXL1Q08397 574 aaPredicted RBP11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 TRAM2Q15035 370 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 MSMPQ1L6U9 139 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 IFI44LQ53G44 452 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 TBPL2Q6SJ96 375 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 FKBP9P1Q75LS8 142 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 TSEN54Q7Z6J9 526 aaKnown RBP11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 CPLX4Q7Z7G2 160 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 MEX3DQ86XN8 651 aaKnown RBP11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 NRMQ8IXM6 262 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 OFCC1Q8IZS5 231 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 ZCCHC24Q8N2G6 241 aaKnown RBP11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 SVOPLQ8N434 492 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 NOXO1Q8NFA2 376 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 OR4K5Q8NGD3 323 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 HSH2DQ96JZ2 352 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 TNFRSF13CQ96RJ3 184 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 TXNIPQ9H3M7 391 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 HIF3AQ9Y2N7 669 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
AP002856.2-201ENST00000416553 SH3PXD2BA1X283 911 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 NPIPB13A6NJU9 1138 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 NPIPB4C9JG80 1138 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 IGFBP1P08833 259 aaPredicted RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 PDLIM4P50479 330 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 ZNF84P51523 738 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 GYS2P54840 703 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 FHL1Q13642 323 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 NRN1LQ496H8 165 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 ALG10Q5BKT4 473 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 HDDC2Q7Z4H3 204 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 PRIMA1Q86XR5 153 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 CDK20Q8IZL9 346 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 RNF113BQ8IZP6 322 aaKnown RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 LRRC75AQ8NAA5 344 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 RBM15BQ8NDT2 890 aaKnown RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 HDAC2Q92769 488 aaKnown RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 FAM162AQ96A26 154 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 NMD3Q96D46 503 aaKnown RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 FOXN4Q96NZ1 517 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 RAB1BQ9H0U4 201 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 STX18Q9P2W9 335 aaKnown RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 EGFL7Q9UHF1 273 aa11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 FBXO9Q9UK97 447 aaPredicted RBP11.66□□□□□ -0.54
AP002856.2-201ENST00000416553 ZNF346Q9UL40 294 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms