RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 YIPF7Q8N8F6 280 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 OR8J1Q8NGP2 316 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 KLHL15Q96M94 604 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 TMEM43Q9BTV4 400 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 SLC19A3Q9BZV2 496 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 UCK2Q9BZX2 261 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 TXNL4BQ9NX01 149 aaKnown RBP13.02□□□□□ -0.33
SGCE-202ENST00000415788 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 HDGFL3Q9Y3E1 203 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 ATRXP46100 2492 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 A0A0B4J293 547 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 A0A0G2JMP0 313 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 LINC00854A0A1B0GVQ3 168 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 TMEM72A0PK05 275 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 PLA2G10O15496 165 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 C1QL1O75973 258 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 LYPD3O95274 346 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 PRB1P04280 392 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 H1F0P07305 194 aaKnown RBP13.01□□□□□ -0.33
SGCE-202ENST00000415788 POU2F1P14859 743 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 ABOP16442 354 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 IL11P20809 199 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 SDC2P34741 201 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 STARP49675 285 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 AP2S1P53680 142 aaPredicted RBP13.01□□□□□ -0.33
SGCE-202ENST00000415788 CLDN18P56856 261 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 PPP3R1P63098 170 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 RIPPLY1Q0D2K3 151 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 TMEM176BQ3YBM2 270 aaPredicted RBP13.01□□□□□ -0.33
SGCE-202ENST00000415788 DCST1Q5T197 706 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 LINC00114Q6XXX2 140 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 PRICKLE2Q7Z3G6 844 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 C19orf18Q8NEA5 215 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 DEDD2Q8WXF8 326 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 SMPDL3BQ92485 455 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 SNAPC3Q92966 411 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 WDYHV1Q96HA8 205 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 TMEM185BQ9H7F4 350 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 ISYNA1Q9NPH2 558 aa13.01□□□□□ -0.33
SGCE-202ENST00000415788 RBFOX1Q9NWB1 397 aaKnown RBP13.01□□□□□ -0.33
SGCE-202ENST00000415788 PLEKHB1Q9UF11 243 aaPredicted RBP13.01□□□□□ -0.33
SGCE-202ENST00000415788 IRGMA1A4Y4 181 aa13□□□□□ -0.33
SGCE-202ENST00000415788 SHOXO15266 292 aa13□□□□□ -0.33
SGCE-202ENST00000415788 TFPIP10646 304 aa13□□□□□ -0.33
SGCE-202ENST00000415788 PTGER4P35408 488 aa13□□□□□ -0.33
SGCE-202ENST00000415788 TLE1Q04724 770 aa13□□□□□ -0.33
SGCE-202ENST00000415788 HNRNPA0Q13151 305 aaKnown RBP13□□□□□ -0.33
SGCE-202ENST00000415788 DOC2BQ14184 412 aa13□□□□□ -0.33
SGCE-202ENST00000415788 TRIQKQ629K1 86 aa13□□□□□ -0.33
SGCE-202ENST00000415788 FGD2Q7Z6J4 655 aa13□□□□□ -0.33
SGCE-202ENST00000415788 GGNQ86UU5 652 aa13□□□□□ -0.33
SGCE-202ENST00000415788 SPERTQ8NA61 448 aa13□□□□□ -0.33
SGCE-202ENST00000415788 ATP6V1C2Q8NEY4 427 aa13□□□□□ -0.33
SGCE-202ENST00000415788 FAM57AQ8TBR7 257 aa13□□□□□ -0.33
SGCE-202ENST00000415788 KCTD7Q96MP8 289 aa13□□□□□ -0.33
SGCE-202ENST00000415788 PRSS27Q9BQR3 290 aa13□□□□□ -0.33
SGCE-202ENST00000415788 B3GNT2Q9NY97 397 aa13□□□□□ -0.33
SGCE-202ENST00000415788 MRPL39Q9NYK5 338 aaKnown RBP13□□□□□ -0.33
SGCE-202ENST00000415788 RHCGQ9UBD6 479 aa13□□□□□ -0.33
SGCE-202ENST00000415788 DIMT1Q9UNQ2 313 aaKnown RBP13□□□□□ -0.33
SGCE-202ENST00000415788 ZNF835Q9Y2P0 537 aa13□□□□□ -0.33
SGCE-202ENST00000415788 NCKAP5O14513 1909 aa13□□□□□ -0.33
SGCE-202ENST00000415788 ITPR1Q14643 2758 aa13□□□□□ -0.33
SGCE-202ENST00000415788 KMT2BQ9UMN6 2715 aaPredicted RBP13□□□□□ -0.33
SGCE-202ENST00000415788 LOC105371267A0A1B0GV96 52 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 PRRG2O14669 202 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 SLC19A2O60779 497 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 NOS1APO75052 506 aaPredicted RBP12.99□□□□□ -0.33
SGCE-202ENST00000415788 NPIPB7O75200 414 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 SLC43A1O75387 559 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 GABRA1P14867 456 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 POU1F1P28069 291 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 SFTPDP35247 375 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 CLDN20P56880 219 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 ZNF91Q05481 1191 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 MAB21L1Q13394 359 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 TATDN3Q17R31 274 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 SLC25A30Q5SVS4 291 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 CHMP1BQ7LBR1 199 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 OR2V1Q8NHB1 315 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 MIB2Q96AX9 1013 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 TRMT61AQ96FX7 289 aaKnown RBP12.99□□□□□ -0.33
SGCE-202ENST00000415788 ADGRG7Q96K78 797 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 TSSK6Q9BXA6 273 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 MAN2C1Q9NTJ4 1040 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 REV1Q9UBZ9 1251 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 CLEC2DQ9UHP7 191 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 BSNQ9UPA5 3926 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 IGKV1D-42A0A075B6H8 117 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 FIGNL2A6NMB9 653 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 AHRRA9YTQ3 701 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 EIF1AYO14602 144 aaKnown RBP12.99□□□□□ -0.33
SGCE-202ENST00000415788 OR2T1O43869 369 aa12.99□□□□□ -0.33
SGCE-202ENST00000415788 WDR1O75083 606 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms