RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
SF3B1-204ENST00000414963 SLC15A1P46059 708 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 CLRN1P58418 232 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 LCN6P62502 163 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 LRFN4Q6PJG9 635 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 SLC25A47Q6Q0C1 308 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 B3GNT6Q6ZMB0 384 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 FAM214BQ7L5A3 538 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 ZNF786Q8N393 782 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 SYT14Q8NB59 555 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 OR9Q1Q8NGQ5 310 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 NUAK2Q9H093 628 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 RACGAP1Q9H0H5 632 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 RPRD1BQ9NQG5 326 aaKnown RBP12.62□□□□□ -0.39
SF3B1-204ENST00000414963 FKBP14Q9NWM8 211 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 ASB6Q9NWX5 421 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 GLTPQ9NZD2 209 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 PSORS1C1Q9UIG5 152 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 B9D1Q9UPM9 204 aa12.62□□□□□ -0.39
SF3B1-204ENST00000414963 RPL36Q9Y3U8 105 aaKnown RBP12.62□□□□□ -0.39
SF3B1-204ENST00000414963 SLC1A7O00341 560 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 DCTN6O00399 190 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 SLC16A7O60669 478 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 KHDRBS3O75525 346 aaKnown RBP12.61□□□□□ -0.39
SF3B1-204ENST00000414963 TOXO94900 526 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 GLCEO94923 617 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 GLI4P10075 376 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 CLUP10909 449 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 CTLA4P16410 223 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 KIR2DL2P43627 348 aaPredicted RBP12.61□□□□□ -0.39
SF3B1-204ENST00000414963 BLVRAP53004 296 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 CDH11P55287 796 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 APOFQ13790 326 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 STK11Q15831 433 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 LINC01590Q5TEZ4 76 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 DNM1P34Q6PK57 102 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 NUFIP2Q7Z417 695 aaKnown RBP12.61□□□□□ -0.39
SF3B1-204ENST00000414963 BPIFB6Q8NFQ5 453 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 KISS1RQ969F8 398 aaPredicted RBP12.61□□□□□ -0.39
SF3B1-204ENST00000414963 MCHR2Q969V1 340 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 TSSK2Q96PF2 358 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 TTYH2Q9BSA4 534 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 OR51V1Q9H2C8 321 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 SLCO5A1Q9H2Y9 848 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 DUSP21Q9H596 190 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
SF3B1-204ENST00000414963 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 CNOT2Q9NZN8 540 aaKnown RBP12.61□□□□□ -0.39
SF3B1-204ENST00000414963 MYRFQ9Y2G1 1151 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 EMC9Q9Y3B6 208 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 TPRKBQ9Y3C4 175 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 ALPK2Q86TB3 2170 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 GTF3C1Q12789 2109 aa12.61□□□□□ -0.39
SF3B1-204ENST00000414963 SVILO95425 2214 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 EFCAB10A6NFE3 127 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 E9PLN8 166 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 GYPBP06028 91 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 QDPRP09417 244 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 DBTP11182 482 aaKnown RBP12.6□□□□□ -0.39
SF3B1-204ENST00000414963 PIPP12273 146 aaPredicted RBP12.6□□□□□ -0.39
SF3B1-204ENST00000414963 OR3A2P47893 321 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 MTNR1AP48039 350 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 NUDT6P53370 316 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 ZNF91Q05481 1191 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 GGTLC2Q14390 218 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 KCTD21Q4G0X4 260 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 PHYHD1Q5SRE7 291 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 CARD17Q5XLA6 110 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 POMGNT2Q8NAT1 580 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 OR6K3Q8NGY3 331 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 OR6N1Q8NGY5 312 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 ZNRF4Q8WWF5 429 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 IPCEF1Q8WWN9 437 aaPredicted RBP12.6□□□□□ -0.39
SF3B1-204ENST00000414963 APH1AQ96BI3 265 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 ZNF696Q9H7X3 374 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 MARCH7Q9H992 704 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
SF3B1-204ENST00000414963 EXOGQ9Y2C4 368 aaKnown RBP12.6□□□□□ -0.39
SF3B1-204ENST00000414963 IGKV1D-43A0A0B4J1Z2 117 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 IRGMA1A4Y4 181 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 XPNPEP2O43895 674 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 FAM20BO75063 409 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 UPK3AO75631 287 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 TNFSF13O75888 250 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 TNFAIP8O95379 198 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 CNOT4O95628 575 aaKnown RBP12.59□□□□□ -0.39
SF3B1-204ENST00000414963 IL2RAP01589 272 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 STSP08842 583 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 GSTT1P30711 240 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 PYCR1P32322 319 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 CA7P43166 264 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 CASP6P55212 293 aa12.59□□□□□ -0.39
SF3B1-204ENST00000414963 GABARAPL2P60520 117 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms