RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 NOX3Q9HBY0 568 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 ACER3Q9NUN7 267 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 COA3Q9Y2R0 106 aaPredicted RBP15.83■□□□□ 0.12
PHRF1-202ENST00000413872 ASB1Q9Y576 335 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 TIMM10BQ9Y5J6 103 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 UPK1AO00322 258 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 RGS11O94810 467 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 IL3RAP26951 378 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 SDHAP31040 664 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 ARR3P36575 388 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 VEGFCP49767 419 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 GPR85P60893 370 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 C1orf210Q8IVY1 113 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 ITPKCQ96DU7 683 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 OR5B12Q96R08 314 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 KNL1Q8NG31 2342 aa15.83■□□□□ 0.12
PHRF1-202ENST00000413872 MYO5AQ9Y4I1 1855 aaKnown RBP15.83■□□□□ 0.12
PHRF1-202ENST00000413872 F2RL1P55085 397 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 WDR5BQ86VZ2 330 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 PFN4Q8NHR9 129 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 GAB3Q8WWW8 586 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 DPCDQ9BVM2 203 aaPredicted RBP15.82■□□□□ 0.12
PHRF1-202ENST00000413872 PROCRQ9UNN8 238 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 TRDV1A0A1B0GX56 115 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 KRBA1A5PL33 1030 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 A6NHS1 94 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 ATF4P18848 351 aaPredicted RBP15.82■□□□□ 0.12
PHRF1-202ENST00000413872 RPS25P62851 125 aaKnown RBP15.82■□□□□ 0.12
PHRF1-202ENST00000413872 SRPXP78539 464 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 OLIG3Q7RTU3 272 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 SLC46A3Q7Z3Q1 461 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 ARIH2OSQ8N7S6 290 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 ICOSLGO75144 302 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 CBR3O75828 277 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 PIPP12273 146 aaPredicted RBP15.82■□□□□ 0.12
PHRF1-202ENST00000413872 ZNF133P52736 654 aaPredicted RBP15.82■□□□□ 0.12
PHRF1-202ENST00000413872 ZNF92Q03936 586 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 ESCO2Q56NI9 601 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 OR2A25A4D2G3 310 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 MEIS3P1A6NDR6 274 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 BLVRBP30043 206 aaPredicted RBP15.82■□□□□ 0.12
PHRF1-202ENST00000413872 DEFB109BQ30KR1 87 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 ALG14Q96F25 216 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 OXGR1Q96P68 337 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 SELENOIQ9C0D9 397 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 CMC2Q9NRP2 79 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 KCNG2Q9UJ96 466 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 HDGFL3Q9Y3E1 203 aa15.82■□□□□ 0.12
PHRF1-202ENST00000413872 RNF4P78317 190 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 SFXN4Q6P4A7 337 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 ZNF620Q6ZNG0 422 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 CD163Q86VB7 1156 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 OR56B2PQ8NGI1 322 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 DEFB127Q9H1M4 99 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TMEM100Q9NV29 134 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 RAB22AQ9UL26 194 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TNFRSF10AO00220 468 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TNK1Q13470 666 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 EXD3Q8N9H8 876 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 RPP25Q9BUL9 199 aaKnown RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 PRR14Q9BWN1 585 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TXNL4BQ9NX01 149 aaKnown RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 KIF25Q9UIL4 384 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 PTPRZ1P23471 2315 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TMEM129A0AVI4 362 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 OR2J2O76002 312 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 ARF1P84077 181 aaKnown RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 NHSL2Q5HYW2 709 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 B3GLCTQ6Y288 498 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 Q6ZTK2 550 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 GPBAR1Q8TDU6 330 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 INTS12Q96CB8 462 aaKnown RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TIMD4Q96H15 378 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TEAD3Q99594 435 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 TSNAXQ99598 290 aaKnown RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 A0A0A6YYD5 115 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 IGHV1OR15-9A0A0B4J2B8 117 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 HSPB2A8KAH6 182 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 UBL3O95164 117 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 NAGAP17050 411 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 NFYAP23511 347 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 CLDN6P56747 220 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 FZD2Q14332 565 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 HSPB2Q16082 182 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 SEMA6DQ8NFY4 1073 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 SGK3Q96BR1 496 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 RTL8AQ9BWD3 113 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 SPACA1Q9HBV2 294 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 E9PI62 339 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 CRYABP02511 175 aaKnown RBP15.81■□□□□ 0.12
PHRF1-202ENST00000413872 OR6V1Q8N148 313 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 FAM26EQ8N5C1 309 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 STK35Q8TDR2 534 aa15.81■□□□□ 0.12
PHRF1-202ENST00000413872 CEBPZOSA8MTT3 80 aa15.8■□□□□ 0.12
PHRF1-202ENST00000413872 I6L893 689 aaPredicted RBP15.8■□□□□ 0.12
PHRF1-202ENST00000413872 MT-CO3P00414 261 aa15.8■□□□□ 0.12
PHRF1-202ENST00000413872 CHRM2P08172 466 aa15.8■□□□□ 0.12
PHRF1-202ENST00000413872 SBK2P0C263 348 aa15.8■□□□□ 0.12
PHRF1-202ENST00000413872 RBMS2Q15434 407 aaKnown RBP15.8■□□□□ 0.12
PHRF1-202ENST00000413872 ZNF767PQ75MW2 155 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms