RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 FXNQ16595 210 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 HIST3H3Q16695 136 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 ARMC4Q5T2S8 1044 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 MBOAT2Q6ZWT7 520 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 RRM2BQ7LG56 351 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 PIWIL3Q7Z3Z3 882 aaKnown RBP12.86□□□□□ -0.35
LIMS4-201ENST00000413601 HDDC2Q7Z4H3 204 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 OAFQ86UD1 273 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 IGFN1Q86VF2 1251 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 SKA3Q8IX90 412 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 RNF113BQ8IZP6 322 aaKnown RBP12.86□□□□□ -0.35
LIMS4-201ENST00000413601 NOXO1Q8NFA2 376 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 OR51A7Q8NH64 312 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 SLC7A13Q8TCU3 470 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 HTRA1Q92743 480 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 MCHR2Q969V1 340 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 TNFRSF13CQ96RJ3 184 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 ANKRD19PQ9H560 264 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 TMEM38BQ9NVV0 291 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
LIMS4-201ENST00000413601 IGHV2OR16-5A0A0B4J2B6 119 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 B2RBV5 119 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 ARPC2O15144 300 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 H1F0P07305 194 aaKnown RBP12.85□□□□□ -0.35
LIMS4-201ENST00000413601 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 RHCEP18577 417 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 GIPRP48546 466 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 PTDSS1P48651 473 aaKnown RBP12.85□□□□□ -0.35
LIMS4-201ENST00000413601 MNAT1P51948 309 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 CTXN1P60606 82 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 RAB1AP62820 205 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 HGFACQ04756 655 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 TNK1Q13470 666 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 CLEC12BQ2HXU8 276 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 FGD3Q5JSP0 725 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 PODNL1Q6PEZ8 512 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 VHLLQ6RSH7 139 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 BIVMQ86UB2 503 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 SLC22A24Q8N4F4 322 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 LRRC75AQ8NAA5 344 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 CCDC197Q8NCU1 140 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 OR13C2Q8NGS9 318 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 NANOS1Q8WY41 292 aaKnown RBP12.85□□□□□ -0.35
LIMS4-201ENST00000413601 HDAC2Q92769 488 aaKnown RBP12.85□□□□□ -0.35
LIMS4-201ENST00000413601 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 PYURFQ96I23 114 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 NSL1Q96IY1 281 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 COX4I2Q96KJ9 171 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 NSMCE2Q96MF7 247 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 ZNF75AQ96N20 296 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 SEPHS2Q99611 448 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 TXNIPQ9H3M7 391 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 CA10Q9NS85 328 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 FAM53CQ9NYF3 392 aa12.85□□□□□ -0.35
LIMS4-201ENST00000413601 A0A1W2PRQ8 180 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 NPIPB13A6NJU9 1138 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 CENPBD1B2RD01 187 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 NPIPB4C9JG80 1138 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 CDC42EP2O14613 210 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 UBL3O95164 117 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 OR8G3PP0DMU2 310 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 ZNF14P17017 642 aaPredicted RBP12.84□□□□□ -0.35
LIMS4-201ENST00000413601 SLC9A3P48764 834 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 ZNF84P51523 738 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 RPL27P61353 136 aaKnown RBP12.84□□□□□ -0.35
LIMS4-201ENST00000413601 CHRNB3Q05901 458 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 DGCR6Q14129 220 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 ETFDHQ16134 617 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 MST1LQ2TV78 715 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 TMPRSS11FQ6ZWK6 438 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 Q71RC1 249 aaPredicted RBP12.84□□□□□ -0.35
LIMS4-201ENST00000413601 OR4F15Q8NGB8 312 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 OR52J3Q8NH60 311 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 FAM46AQ96IP4 442 aaKnown RBP12.84□□□□□ -0.35
LIMS4-201ENST00000413601 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 STX18Q9P2W9 335 aaKnown RBP12.84□□□□□ -0.35
LIMS4-201ENST00000413601 ADAM21Q9UKJ8 722 aa12.84□□□□□ -0.35
LIMS4-201ENST00000413601 ZNF346Q9UL40 294 aaKnown RBP12.84□□□□□ -0.35
LIMS4-201ENST00000413601 TRBV4-1A0A0J9YWV2 114 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 SSX4O60224 188 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 SLC2A10O95528 541 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 RAB36O95755 333 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 IGHMP01871 453 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 SEMG1P04279 462 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 ITGA2P17301 1181 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 THBS4P35443 961 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 SERPINF1P36955 418 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 FMODQ06828 376 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 CD47Q08722 323 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 RAB39AQ14964 217 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 RAB35Q15286 201 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 SEC23BQ15437 767 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 TAF11Q15544 211 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 ADIPOQQ15848 244 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 SWI5Q1ZZU3 235 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 ANKDD1AQ495B1 522 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 SPATS1Q496A3 300 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms