RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 NMUR2Q9GZQ4 415 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 SYT4Q9H2B2 425 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 C1orf198Q9H425 327 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 GIN1Q9NXP7 522 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 B4GALT7Q9UBV7 327 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4Q9UBX2 424 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 PRODH2Q9UF12 536 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DCDC2Q9UHG0 476 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 LGALS13Q9UHV8 139 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 NXT1Q9UKK6 140 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 MMP17Q9ULZ9 603 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 UBQLN1Q9UMX0 589 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 TSSC4Q9Y5U2 329 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 URGCP-MRPS24S4R325 110 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 LRPPRCP42704 1394 aaKnown RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 A0A1B0GTH9 108 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 TSPAN11A1L157 253 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 MEIOCA2RUB1 952 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 PRR23AA6NEV1 266 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 USP27XA6NNY8 438 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF705EA8MWA4 302 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 LOC110117498-PIK3R3F6TDL0 507 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 G3V3Y1 287 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ITGB1BP1O14713 200 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 B4GALT5O43286 388 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ZMPSTE24O75844 475 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 PLEKHA8P1O95397 391 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 FADS2O95864 444 aaKnown RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 RD3LP0DJH9 198 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF26P17031 533 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 AQP2P41181 271 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 P2RY2P41231 377 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ALDH3B2P48448 385 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 SSR4P51571 173 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ARHGDIBP52566 201 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 RIDAP52758 137 aaKnown RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 STXBP1P61764 594 aaKnown RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ACTA2P62736 377 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ACTG2P63267 376 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ACTC1P68032 377 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ACTA1P68133 377 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 SLC10A7Q0GE19 358 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ECH1Q13011 328 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ITGB3BPQ13352 177 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 DGCR6Q14129 220 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 CCL14Q16627 93 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 NSUN5P1Q3KNT7 163 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ADAMTSL4-AS1Q5T5F5 129 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 TMIGD1Q6UXZ0 262 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF546Q86UE3 836 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 PIANPQ8IYJ0 282 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 OR2AP1Q8NGE2 309 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 OR51F2Q8NH61 342 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 CDKL2Q92772 493 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 PSMG2Q969U7 264 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 CENPNQ96H22 339 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 LITAFQ99732 161 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 C7orf50Q9BRJ6 194 aaKnown RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 NAT9Q9BTE0 207 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 CCDC94Q9BW85 323 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF696Q9H7X3 374 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 NECAP2Q9NVZ3 263 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 RBAKQ9NYW8 714 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 MRPS28Q9Y2Q9 187 aaKnown RBP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 PYGO1Q9Y3Y4 419 aa3.62□□□□□ -1.83
BRCA1-204ENST00000412061 PUS1Q9Y606 427 aaKnown RBP eCLIP3.62□□□□□ -1.83
BRCA1-204ENST00000412061 MPDU1O75352 247 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 MYO1DO94832 1006 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 LSM8O95777 96 aaKnown RBP3.61□□□□□ -1.83
BRCA1-204ENST00000412061 LALBAP00709 142 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 IGLV1-44P01699 117 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 HBE1P02100 147 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 KLK3P07288 261 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-204ENST00000412061 HCKP08631 526 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF250P15622 560 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 SYT1P21579 422 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ADORA2BP29275 332 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 RPL29P47914 159 aaKnown RBP3.61□□□□□ -1.83
BRCA1-204ENST00000412061 STX17P56962 302 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 UBE2KP61086 200 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 CHRNB3Q05901 458 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 GGTLC2Q14390 218 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 PSMD5Q16401 504 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 PGGHGQ32M88 737 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 KRTAP24-1Q3LI83 254 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 TMEM30BQ3MIR4 351 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 C5orf47Q569G3 176 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 APOBEC3HQ6NTF7 200 aaKnown RBP3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ARMCX5Q6P1M9 558 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 RFWD3Q6PCD5 774 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 TPGS1Q6ZTW0 290 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ACOT7LQ6ZUV0 252 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 LRRTM1Q86UE6 522 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 LHFPL3Q86UP9 236 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 NRMQ8IXM6 262 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 PUSL1Q8N0Z8 303 aaKnown RBP3.61□□□□□ -1.83
BRCA1-204ENST00000412061 FTMTQ8N4E7 242 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 MREGQ8N565 214 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 CDRT4Q8N9R6 151 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 SNX31Q8N9S9 440 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms